G157020


Basic Information

Item Value
gene id G157020
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 20354463 ~ 20354668 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197754
attgaattataacacttgctagtagaggCAGTGTGCGGGAGcatcgttttcaaattaatcaatcacatatgcaataacatggcagctaatggggatctgtataaacacactaaactaacacatgagaagggatgttatatggtgacacattgtcactcttcatactcctcttcctcttcactgctactcccttctctgggtttcat

Function

GO: NA

KEGG:

id description
ko02010 ABC transporters
ko04976 Bile secretion
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU197754 True 206 lncRNA 0.40 1 20354463 20354668

Neighbor

gene id symbol gene type direction distance location
AMCG00006193 LOC107744650,LOC103355422 coding downstream 366052 19984679 ~ 19988411 (-)
AMCG00006194 LOC106613507,LOC106574153 coding downstream 431992 19895425 ~ 19922471 (-)
AMCG00006197 NA coding downstream 472546 19880050 ~ 19881917 (-)
AMCG00006196 ptprd,LOC107559826,LOC107717167,LOC107744639 coding downstream 479532 19871892 ~ 19874931 (-)
AMCG00006195 LOC102214220 coding downstream 495094 19824825 ~ 19859369 (-)
G157011 NA non-coding downstream 125360 20228586 ~ 20229103 (-)
G156979 NA non-coding downstream 549292 19804948 ~ 19805171 (-)
G156971 NA non-coding downstream 636784 19717173 ~ 19717679 (-)
G156947 uhrf1,LOC107561590,LOC107742786,LOC107549364 non-coding downstream 864622 19485550 ~ 19489841 (-)
G156946 LOC107742786 non-coding downstream 874026 19479468 ~ 19480437 (-)
G157030 NA non-coding upstream 11921 20366589 ~ 20366830 (-)
G157038 NA non-coding upstream 64306 20418974 ~ 20419284 (-)
G157042 NA non-coding upstream 95804 20450472 ~ 20486674 (-)
G157055 NA non-coding upstream 220775 20575443 ~ 20588795 (-)
G157057 NA non-coding upstream 269405 20624073 ~ 20744100 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other downstream 891258 19448931 ~ 19463205 (-)
G156907 NA other downstream 1060643 19275200 ~ 19293820 (-)
AMCG00006127 NA other downstream 3390813 16947997 ~ 16963650 (-)
G156341 NA other downstream 3673691 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 3832774 16505364 ~ 16521689 (-)
G157059 NA other upstream 355131 20709799 ~ 20712216 (-)

Expression


Co-expression Network