G157034


Basic Information

Item Value
gene id G157034
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 20408518 ~ 20408775 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197768
GAGTGTTTGTGCCCGTCATACCATTCCTGAAACTCTGCTTTATCAGCACCCATCGTGTAGTCTACCCCGTAAATTTGTTCAGCAGGTAAGGGGCCTACATAATTTTGGTTTGcaacagtattaaaaaagtGTGGGAAATGTCCTTTCGCACCCTCAAACCCCATTGCTTTTGGCATATTGCTCAGTTTCATAGGCAGGAAATTTAATGAATCAATGAACCTAATGTTCAGAGCGGTCACTGTCATACACAtaatttta

Function

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197768 True 258 lncRNA 0.41 1 20408518 20408775

Neighbor

gene id symbol gene type direction distance location
AMCG00006198 NA coding upstream 629073 19778653 ~ 19779445 (+)
AMCG00006179 NA coding upstream 706220 19700763 ~ 19702298 (+)
AMCG00006180 NA coding upstream 726752 19648606 ~ 19681766 (+)
AMCG00006182 NA coding upstream 797353 19600813 ~ 19611165 (+)
AMCG00006181 kdm4b,LOC101065945,LOC106519213,LOC108234360,LOC106937923 coding upstream 868832 19523739 ~ 19539686 (+)
G157014 NA non-coding upstream 120549 20287631 ~ 20287969 (+)
G157010 NA non-coding upstream 179415 20228586 ~ 20229103 (+)
G157009 NA non-coding upstream 184905 20223334 ~ 20223613 (+)
G156933 NA non-coding upstream 1007114 19401014 ~ 19401404 (+)
G156930 NA non-coding upstream 1013490 19394816 ~ 19395028 (+)
G157056 NA non-coding downstream 215298 20624073 ~ 20744205 (+)
G157061 NA non-coding downstream 335478 20744253 ~ 20744531 (+)
G157062 NA non-coding downstream 335830 20744605 ~ 20745492 (+)
G157067 NA non-coding downstream 339123 20747898 ~ 20748283 (+)
G157077 NA non-coding downstream 436003 20844778 ~ 20845035 (+)
AMCG00006174 NA other upstream 1928431 18478128 ~ 18480087 (+)
AMCG00006138 NA other upstream 2051929 18190224 ~ 18356589 (+)
G156640 NA other upstream 2427881 17973741 ~ 17980637 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 2644290 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 2673434 17662190 ~ 17735084 (+)

Expression


Co-expression Network