G157059


Basic Information

Item Value
gene id G157059
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 20709799 ~ 20712216 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197805
tggttattgtgtcagttcactctcctccatgtctgtctgtgtttctgatgcacatttctacATGCATCCAGCACGTACTGTACCTGAGTTCCACTGGAGGGTCTGACCTGGGAGACACAGTGCGCAAAGTAATGTGTAAGATATTTACCAACAAGCTCATGTCCCACTACAGCATGGAGGGGAAAAATGGAAAGCTGAGGTCTGAAGATCTCTACAACAACAAAGTGATAATAaaagccGTCAAACGCAACAGCAAGGTGTCATCAGAAGTGGAGTTTAAAATAGGAGAGACTCTAAAACTGGCACCACATTGGGAGAAACAATATCAGG

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0042737 drug catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197805 True 330 TUCP 0.44 3 20709799 20712216

Neighbor

gene id symbol gene type direction distance location
AMCG00006193 LOC107744650,LOC103355422 coding downstream 721388 19984679 ~ 19988411 (-)
AMCG00006194 LOC106613507,LOC106574153 coding downstream 787328 19895425 ~ 19922471 (-)
AMCG00006197 NA coding downstream 827882 19880050 ~ 19881917 (-)
AMCG00006196 ptprd,LOC107559826,LOC107717167,LOC107744639 coding downstream 834868 19871892 ~ 19874931 (-)
AMCG00006195 LOC102214220 coding downstream 850430 19824825 ~ 19859369 (-)
G157055 NA non-coding downstream 121004 20575443 ~ 20588795 (-)
G157042 NA non-coding downstream 223125 20450472 ~ 20486674 (-)
G157038 NA non-coding downstream 290515 20418974 ~ 20419284 (-)
G157030 NA non-coding downstream 342969 20366589 ~ 20366830 (-)
G157020 NA non-coding downstream 355131 20354463 ~ 20354668 (-)
G157063 NA non-coding upstream 32030 20744246 ~ 20744954 (-)
G157104 NA non-coding upstream 335600 21047816 ~ 21048023 (-)
G157105 NA non-coding upstream 335998 21048214 ~ 21048621 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other downstream 1246594 19448931 ~ 19463205 (-)
G156907 NA other downstream 1415979 19275200 ~ 19293820 (-)
AMCG00006127 NA other downstream 3746149 16947997 ~ 16963650 (-)
G156341 NA other downstream 4029027 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 4188110 16505364 ~ 16521689 (-)

Expression


Co-expression Network