Fish Transcriptome and Expression Database

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ecological fish

G157104

Basic Information

Item	Value
gene id	G157104
gene name	NA
gene type	non-coding
species	bowfin (Amia calva)
category of species	ecological fish

Chromosome Information

Item	Value
chromosome id	CM030142.1
NCBI id	CM030142.1
chromosome length	21087710
location	21047816 ~ 21048023 (-)
genome version	AmiCal1_2021_bowfin_Genome

Sequence

>TU197859
AccctaaagcccagtgccctgaaactttgcatgtattacatagacactgctatctatcacgtctgcaagagacaagtgactgtgttcaacaacatggcagccacaagaaaatgactgtgcatgaatccaaaatacacatattaacaAAAGCATGATATTGACCCCAGAATAACCTATCAGCAAAAtccaaaaactcaccaaattctGT

Function

NR:

description
PREDICTED: ERBB receptor feedback inhibitor 1-like

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU197859	True	208	lncRNA	0.39	1	21047816	21048023

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
AMCG00006193	LOC107744650,LOC103355422	coding	downstream	1059405	19984679 ~ 19988411 (-)
AMCG00006194	LOC106613507,LOC106574153	coding	downstream	1125345	19895425 ~ 19922471 (-)
AMCG00006197	NA	coding	downstream	1165899	19880050 ~ 19881917 (-)
AMCG00006196	ptprd,LOC107559826,LOC107717167,LOC107744639	coding	downstream	1172885	19871892 ~ 19874931 (-)
AMCG00006195	LOC102214220	coding	downstream	1188447	19824825 ~ 19859369 (-)
G157063	NA	non-coding	downstream	302862	20744246 ~ 20744954 (-)
G157057	NA	non-coding	downstream	303716	20624073 ~ 20744100 (-)
G157055	NA	non-coding	downstream	459021	20575443 ~ 20588795 (-)
G157042	NA	non-coding	downstream	561142	20450472 ~ 20486674 (-)
G157038	NA	non-coding	downstream	628532	20418974 ~ 20419284 (-)
G157105	NA	non-coding	upstream	191	21048214 ~ 21048621 (-)
G157059	NA	other	downstream	335600	20709799 ~ 20712216 (-)
AMCG00006201	LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512	other	downstream	1584611	19448931 ~ 19463205 (-)
G156907	NA	other	downstream	1753996	19275200 ~ 19293820 (-)
AMCG00006127	NA	other	downstream	4084166	16947997 ~ 16963650 (-)
G156341	NA	other	downstream	4367044	16651540 ~ 16680772 (-)

Expression

Co-expression Network