AMCG00006209


Basic Information

Item Value
gene id AMCG00006209
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 142072 ~ 146398 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006209
ACGGGGGCGAAGGGGGATGAGGAAGTGAGCAGTTTCACAATGAGACGCGGAGACGGGTCTGAAGAGGCGCAGGGATCCAGAGTGGCGTTGAGACGGACATACGGACAGATAGACGGCCAGTGAAATCTTCCGATCGATAGCGATGCGTGCTGCAACGTGTTTGACTGTCCTGCAGTTCCTCTGTCTGGCAGCAGGGGGAGCTCTGTCTGCAATCTCCTGCTACAACGACCAGGGGACGGCCGTGGACTGgctgtaTCTATACAAGCTCCCCCGGCCCTCTCAGAGCCCCCCGGAGGAGGGGATGCGCTACCTGCTGCTGCAGCCAGGGGGCGGGGCCTGGACACAGGGGGCGGGACTAGTGAACGACAGCGGGGAAGCGCTGGGCCGCACTGTGGGACAGCTGTACAAACTGGGACAGGAGGAGGATGTGGCCTACATCCTGTACAATGACCAGACTCCTCCGAGccacggagagagggagaagaacgAGTGTGGGCACACTAAGGGTGTGGTCCTATTGGACAAGACTCAGGGCTTCTGGTTGGTCCACAGCACGCCTCACTTCCCCCCGAGACAGGAAGTGGGCACGTTCTCGTACCCGGAGACAGGGGTGGAGAACGGACAGAACTTCCTGTGCGTGACCTTCCCTGTGGAGCGGTTCCAGAGCATCGGAGAGCAGCTGCAGCTCAACCAGCCCCTGGTGTACGACTGCTCCGTGCCCCCCGCACTCGCCTCCGTCCTGCCCGCCCTCAACCAGCTCTGCAGGAAGGACCGCGCGCCGCCGCCCCCCCCGCGCTCCCTCGCCGAGCGGGACAACCGCAGTGCGTCCCTGCTGTCTCTGGGGGGGGCGTCCTTCACCAGCTTCGCCAAGAGCGCCTCCTTCGGTGACGacCTCTATGTGTCCTGGGTCGCTCCCTCCCTGCAGTCGGACCTGTTGGTGCAGTTCTGGCGCCGCTCGGCCGGAGTTCTGCCCTCCAACTGCTCCCTCAGCCAGCGGGTGCTGAACGTGCAGCGCATCGGGcccggggggggcgggggaggtgTGGAGCCGTTCAAATCCACGCAGGATCACTCCAAGTGGGCAGTGAGTGTGGAGGGACAGGGCCAGCCAGGAGAGGGGGGGGGCTGGGTCTGCGTGGGAGACATCAACCGCAACCTGgcggaggagaggagagggggagggacgGTGTGTGTGCAGGAGGTGGAGGTGTGGAAGGCGTACAGGACCGCTGTACTGGAGTTCGAGGACTgctagagagagggagggagagagagggaggggacgGAGTGTCCACTGGAGCTGTTACTGCACTGAATAAAGAGCCACTCGGATCAACAATGTACTGGTGTCGGCATCCCTCCCTGTGTCTGTCCGTCAATCGAtgcccccctctccctccccctctcttctgTAACTCTGC

Function

GO: NA

KEGG:

id description
K01158 DNASE2; deoxyribonuclease II

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006209 True 1421 mRNA 0.64 7 142072 146398

Neighbor

gene id symbol gene type direction distance location
AMCG00006212 NA coding downstream 33530 99902 ~ 108542 (-)
AMCG00006211 LOC102301914 coding downstream 52583 70319 ~ 89489 (-)
AMCG00006203 NA coding downstream 97945 10483 ~ 44127 (-)
AMCG00006210 NA coding upstream 973 147371 ~ 150061 (-)
AMCG00006213 NA coding upstream 17204 163602 ~ 165518 (-)
AMCG00006214 NA coding upstream 19522 165920 ~ 172382 (-)
AMCG00006219 NA coding upstream 34986 181384 ~ 195349 (-)
AMCG00006220 NA coding upstream 89928 236326 ~ 242133 (-)
G108349 NA non-coding downstream 23673 117137 ~ 118399 (-)
G108329 NA non-coding downstream 102723 33213 ~ 39349 (-)
G108323 NA non-coding downstream 120722 17554 ~ 21350 (-)
G108365 NA non-coding upstream 124358 270756 ~ 278261 (-)
G108366 NA non-coding upstream 218880 365278 ~ 368624 (-)
G108397 NA non-coding upstream 289003 435401 ~ 435621 (-)
G108427 NA non-coding upstream 439144 585542 ~ 712764 (-)
G108451 NA non-coding upstream 624713 771111 ~ 771337 (-)
G108379 NA other upstream 187390 333788 ~ 343011 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other upstream 247434 393832 ~ 397899 (-)
AMCG00006241 NA other upstream 333184 479582 ~ 562415 (-)
AMCG00006243 NA other upstream 554137 700535 ~ 701940 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 579666 726064 ~ 748736 (-)

Expression


Co-expression Network