AMCG00006210


Basic Information

Item Value
gene id AMCG00006210
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 147371 ~ 150061 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006210
ggagagagtgtcagtCTGAACCGCTGAGTTCCGGGCTGGGCAGGGGACTCCAGATCAATCGCTCTGATTGACCAGCGATCAGTTGGCACTTGGTTGGCGATCCGCTGGCAATGGTCACTAGGGGTCGGTCGAGGAGGTGACGAACAAGGGAGGAGAGaggtgatagagagagagagggagtgacggCTGACCAGACTAACTGGATGCTGCGCTGCTCCCTAAGTTAATGGAGGTCAAAGTTGAAAGTTTAGAGGTCATACAGTTTAACCTTTTAGTTACCAACAGCAATTTTGTACTGGAGGaggagcgagagggagagagggaggaggagagagagggagagagggaggatgaAAGGAAAACAGTTATTGTACAGACAAGGGATGAGGGAGAtgaagagacagacacagagggagagagggtgagagagacagaacGAGAGGAGGAAGCTGAGAAAGAGGCAGaaagggaagagaggagagagcgagaggcaGTGGGAGAAAgtgaggggcagagagaggaacAGGACACAAACACTGTGACAATTATTGTGAcagagatgaagagagagagggaaggagagggggaggagggccGAGATGGAGAGGTggacagaaaaacagagacacTGGAGGAGGACAAGAGAAAGGAGGAGACTGAAACAGACATAcagaagaagggagagagggatggagggatggaagGGAGGGAAGCAGAGGCAGGGTCACAGGATGACCTGGAAGTAAAGCCTACAGGAAGTGAAACAAACTACAGAGACAGACTGGAccccagagacacagagacacagGAGGGACGGCGCCTCAATGACCAGCGCTGCTCCTTCCGCCGCTCGCGACGGgggagtggggagggggggaggggctgCCACTCTGAGCCTGGCACCCCCCAGCCCCGCCATCGAGTGGTCTTCTCCTCGATGACGTCCCTGCAGAAAGAGGAGTTCTTTGACCTGGTCGCCACCTCCCAGGCCCGTCGGCTTGATGACCAGAGGGCGGAGCTTCATGATGCCCCACCCCTGGGGGGGGGGCGCATGGAGGAGCAGCGGACGGAGCTGCCCCTGgcgctgagagagagggactga

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04660 T cell receptor signaling pathway
ko04658 Th1 and Th2 cell differentiation
ko04659 Th17 cell differentiation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006210 True 1102 mRNA 0.57 5 147371 150061

Neighbor

gene id symbol gene type direction distance location
AMCG00006209 NA coding downstream 973 142072 ~ 146398 (-)
AMCG00006212 NA coding downstream 38829 99902 ~ 108542 (-)
AMCG00006211 LOC102301914 coding downstream 57882 70319 ~ 89489 (-)
AMCG00006203 NA coding downstream 103244 10483 ~ 44127 (-)
AMCG00006213 NA coding upstream 13541 163602 ~ 165518 (-)
AMCG00006214 NA coding upstream 15859 165920 ~ 172382 (-)
AMCG00006219 NA coding upstream 31323 181384 ~ 195349 (-)
AMCG00006220 NA coding upstream 86265 236326 ~ 242133 (-)
AMCG00006222 NA coding upstream 106276 256337 ~ 262432 (-)
G108349 NA non-coding downstream 28972 117137 ~ 118399 (-)
G108329 NA non-coding downstream 108022 33213 ~ 39349 (-)
G108323 NA non-coding downstream 126021 17554 ~ 21350 (-)
G108365 NA non-coding upstream 120695 270756 ~ 278261 (-)
G108366 NA non-coding upstream 215217 365278 ~ 368624 (-)
G108397 NA non-coding upstream 285340 435401 ~ 435621 (-)
G108427 NA non-coding upstream 435481 585542 ~ 712764 (-)
G108451 NA non-coding upstream 621050 771111 ~ 771337 (-)
G108379 NA other upstream 183727 333788 ~ 343011 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other upstream 243771 393832 ~ 397899 (-)
AMCG00006241 NA other upstream 329521 479582 ~ 562415 (-)
AMCG00006243 NA other upstream 550474 700535 ~ 701940 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 576003 726064 ~ 748736 (-)

Expression


Co-expression Network