AMCG00006219


Basic Information

Item Value
gene id AMCG00006219
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 181384 ~ 195349 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006219
ATGCTGGTCAGACTGGGActgaggctgctgctgctgtggacCAAACTGGCGCTCTGTGAAGCGGTGCAGGGCTGGCTGCCTCTCAGTTCTCTCACGGCCGCTCTGAGCTCCTGGACCTCGGCTCTGTGCTCGTTCTTCAGCCTGTGCACCTGGTCCCTGAGCTGGTCCGCTGGGCTGGGCTGGTCCAGGGTGGCCAGTGTGTGCTCCATGCGCTCCCTGAACGGCTCCAGCATGGACAGGCACTCCTTCAGGGCTCTGATGTTGGTGCTCTGTTTCGGGGAGTCGGTGCCAGGACTGCACTGGGGGTTGGAGGGCAGGCTGGGGTGCCAGGGCACCCTGCTGGTCCTGACGCCGCTCCCCGCATCCGCCTGGGCCCCCCAAGGCCCTCCCCGCCTGCCCCCTCTGCTGTGGGCCCTGTCTCTGCCCCTGCGCACCACCCTGCAGCTCCGCGGGGTCGTGCCCTTTGACCCCAGCCCCGCCCCCCCACCGGGCCGCCCCGCCTGGCTGTGGGTGGTGGTCGGCGTGGCGACGGGGCTGGCGGTCGCTGCGGTGGCGGGGGCAGCGGTCGTCGCGGCGATGAGGCTGAGGCGGAGGCGGGGGCCCGGGGGGCCGCAGGCCGAGCCCTGGACACAGCACACGCCACACAGGCCCCGCGAGAGAGGGGCCCCGGGGAGGACGCCGGGCGAGGAGCGCAGGAGCGATGGGGAGTGGAAGAAGAGAGGCAAGGATGCGGGGCGGAAGAGACGAGAGCCGCTGGGGGAGGACGCCATGCGCCTGCGtcctCTGAAACACGAAGTGGACTGTGGGAGTGACGGGGACATTACCCAGAGTTCCCTGGAGGAGGCGGGGCTTGTGGACAGGAAGTGGTCACTCCGGCAGGAAGATGACTCCATCTGCGATCACCGACCCCAGGAGCACAAGCACTTCCAGGTCATGGCTGGAGGACAACAATCCCctgTGTGGGAGGGGAACTCCAGCAGTCGGCTACGCTCTGGCACCAGTCATTGGTGCGGTCCGGACGGGTCGCTGGTTCTGATCCGGGCAGTGCGGAGTGGGCTGGACCGTGTTGCTGTGGAGCTGCTGAGAGCAGGAGTACCGGTCAACAACACAGACCACACTGgcCGCTCGGCGCTGCACTGGGCGTGTGCAggtgaGACGCCCCTCTTCCTGGCAGCTCAGCACGGCTGCTATGACACGGCCCGGCTCCTTCTCCTGCAGGGAGCCAATCAGGAGCTGGCAGACCGCCGAGGCCGTCGCCCCCTGGAGGCGGCCCGCGAGGGATTGCATCACCAGCTGCTGGAGCTGCTATTGGCCCACCGCGCCCAGGGCAGATACGTGCCCTTCCCTGTGGCCTCGGAGACAGCCTGGGAGGACCGTGCCTTCCCACAGTGCCCCTGGACTGGTGCTGCACCCCCCGGCCTTTCAGGGCGGAGTGCTTCATTTTCGGGGGTCATAAGTCATCGGGCGTCACCTCAATATCCCCCACACCTCCTCCAACCGCCAAGTGATAGGCTAGCAGGCAGAAGTGGGAGGGTCTCTCCGCAGCCCAGCCAATCAGCGACGGCCCTGGTCTCGCCCAGAATCCTAGGCCGCCAAGCCCGGCCAATCAGCACCTTGCAGGAAGTCACCTCagaggcagaggaagaggaggagccgGCGCGAGAGCAGGAAGTGGCCCGGGCAGCCACTCCCCACCTCCTGTCCACCAGCACCCAGCAGCCCACACCCAGACCGCGCTCCTTCTCCTGcacccagcatgcactgcggcaCCACCCCCCCGCCTCCAGCGGCCAATCACAGAGCCCCTCAGTCAAGGCAGCCGCGGAGACTGTAGACGCAGGTGGCCTGGGACCCGCCCACACAGAGCTTGGCCAATCACAGGAGGGCTCAGGTCCTGATGCTCTCAGCAACAGCCAAtcggagggggagacggagggagagaggaacTGTAAACACCTGAGAAGGAAACAGAAGCTGACTGAGAGTCCAGACACTGTCCAGACCGTACTGTAGAGAGAGACATTTACCTCCTATTTACCCTGATTtacatctctgtctgtctgtttcacaCACTTACTCTTCTCTGTGTCTAATTCTTTGCACAGTGTTTCCCCCCTCAGTGAACTGAAACACTGACTTCATTAGTGACGTGTTGCGCCTTCAGCTTTGTACACAAACATATATCAAGCTCTGATATTTCCACTGTCAATGTCCCTTGTGTTGGAGCTTCTTGAAATGGACATGACTGGGCCTTAGAGCAGAGGTGCTCTACTCAACTTCTGTCGCCCAAATATTGATTGATCCATGCATTGAATGGGCCGCATACAGCTAAAATGAACGTAAATAATTCAGTGTAATCTGCAATACTCAACCTCAGCTGCAATACAGGCTGTGATTATTGTTCTATCTAGAGATATAAGTAAGAACAACGTTACAGTTCACTTTTATATATAGCACAGACAAAGTAAGACGAAGCAAACCTAATATGGACTCCCTCCGTGGGGCTGCTGAATGGCTGGGGCTTTGTTGACTGAGACTCAGTCCGGGCAGCAGTGAGAGACGGCTTTTGTGTGAATATTCAGATTCCTGTTTCTCAGATTGTTCTCACACTGTACCAGCGGGACACCTCTTGTGAATCCTGCGTGTTTAGTTTCACAGTGTAGCCCGGTTTTATTAAATGTCTTGCAAACTTGAGGAGCAAAGCTTACCATCTTCATTTACACAGAACAACTCTTCCCACTCTTTACTAACGGTTCGGTGCTGTTTGGATTaaactttccttttccttttcactgATTTCTATGGTGTTGTTTCTGTGTCACACCCCAGTTTTCTTTCTAAGATAAACATATTAATCTTTTGGAGTATCTTGTTAATCACCATTAGAAGTGTTTGGACTACTGGACCAGAACAGAGGTGCCTGACGAGGCCACACTCGGCACACACAGCATGTGTTAGTGACGTTACACACTAATGTTTCTCGTTGTAGGTCCTGCTTTCCTGCctcatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006219 True 3010 mRNA 0.59 11 181384 195349

Neighbor

gene id symbol gene type direction distance location
AMCG00006214 NA coding downstream 9002 165920 ~ 172382 (-)
AMCG00006213 NA coding downstream 15866 163602 ~ 165518 (-)
AMCG00006210 NA coding downstream 31323 147371 ~ 150061 (-)
AMCG00006209 NA coding downstream 34986 142072 ~ 146398 (-)
AMCG00006212 NA coding downstream 72842 99902 ~ 108542 (-)
AMCG00006220 NA coding upstream 40977 236326 ~ 242133 (-)
AMCG00006222 NA coding upstream 60988 256337 ~ 262432 (-)
AMCG00006221 NA coding upstream 68288 263637 ~ 266881 (-)
AMCG00006229 NA coding upstream 92342 287691 ~ 290685 (-)
AMCG00006228 NA coding upstream 100857 296206 ~ 299137 (-)
G108330 NA non-coding downstream 6191 140559 ~ 175193 (-)
G108349 NA non-coding downstream 62985 117137 ~ 118399 (-)
G108329 NA non-coding downstream 142035 33213 ~ 39349 (-)
G108323 NA non-coding downstream 160034 17554 ~ 21350 (-)
G108365 NA non-coding upstream 75407 270756 ~ 278261 (-)
G108366 NA non-coding upstream 169929 365278 ~ 368624 (-)
G108397 NA non-coding upstream 240052 435401 ~ 435621 (-)
G108427 NA non-coding upstream 390193 585542 ~ 712764 (-)
G108451 NA non-coding upstream 575762 771111 ~ 771337 (-)
G108379 NA other upstream 138439 333788 ~ 343011 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other upstream 198483 393832 ~ 397899 (-)
AMCG00006241 NA other upstream 284233 479582 ~ 562415 (-)
AMCG00006243 NA other upstream 505186 700535 ~ 701940 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 530715 726064 ~ 748736 (-)

Expression


Co-expression Network