AMCG00006220



Basic Information


Item Value
gene id AMCG00006220
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 236326 ~ 242133 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00006220
ATGGGTCCCTTTCACCCAGTCCTGTCGCGGGGCCACTTCATTCACTGCATCGAAGTAGCTGATATGGTCATTATCCAGCACCCCAACTATGAAGATCCTGGCTGTTCCCGGCACGCTCTGGGTCCCAGTGCAGACAGAGTGGGGGAcgaatatttgtttaatattgatttatcgATGGCCTGTTATTTCCCCTCAGCCACCCACTCCCTGCGCTACTTCTACACGGCTATCTCTGGTGTCAGTGGGCTCCCAGAGTTCTCCATCGTGGGGCAGGTGGATGGGCAGCCGTTTGTCTACTATGACAGCAACACGCAGAGGATGGTGCCCAAGACCAGCTGGATGGAGCGGAGCGACAGGCCTCAGTACTGGGAGAACCAGATTGGTGCTGCTCATAATGCTCATCTGATCTTGCAGGAGGGTTTGGTGACGGTGATGCAACATTTCAACCACAGTGCAGTCCTCCCAGAGGTGTATGTTATACAAAAGAGTGCTGGACCTCATACAACTGAGCTGTCCTGCCTGGCCACGGGCTTCTCCTCCCAAGACGTGGTGCTGTCCTGGCAGAGAGATGGACAGGAGCTGCATGAGGGGGTGGAGAGCGGGGAGCTGCTGTCCAACGGGAACGGGACGTACCAGGTCAGGAAGAGTGTGAGGGTCTCGCCTGAGGACCTGGAGGGACACACCTACACGTGCCATGTGGACCACCTGGGAGAGGAGATCGTCAAGGAGTGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00006220 True 732 mRNA 0.56 3 236326 242133

Neighbor


gene id symbol gene type direction distance location
AMCG00006219 NA coding downstream 40977 181384 ~ 195349 (-)
AMCG00006214 NA coding downstream 63944 165920 ~ 172382 (-)
AMCG00006213 NA coding downstream 70808 163602 ~ 165518 (-)
AMCG00006210 NA coding downstream 86265 147371 ~ 150061 (-)
AMCG00006209 NA coding downstream 89928 142072 ~ 146398 (-)
AMCG00006222 NA coding upstream 14204 256337 ~ 262432 (-)
AMCG00006221 NA coding upstream 21504 263637 ~ 266881 (-)
AMCG00006229 NA coding upstream 45558 287691 ~ 290685 (-)
AMCG00006228 NA coding upstream 54073 296206 ~ 299137 (-)
AMCG00006227 NA coding upstream 69091 311224 ~ 321088 (-)
G108330 NA non-coding downstream 61133 140559 ~ 175193 (-)
G108349 NA non-coding downstream 117927 117137 ~ 118399 (-)
G108329 NA non-coding downstream 196977 33213 ~ 39349 (-)
G108323 NA non-coding downstream 214976 17554 ~ 21350 (-)
G108365 NA non-coding upstream 28623 270756 ~ 278261 (-)
G108366 NA non-coding upstream 123145 365278 ~ 368624 (-)
G108397 NA non-coding upstream 193268 435401 ~ 435621 (-)
G108427 NA non-coding upstream 343409 585542 ~ 712764 (-)
G108451 NA non-coding upstream 528978 771111 ~ 771337 (-)
G108324 NA other downstream 11185 85489 ~ 225141 (-)
G108379 NA other upstream 91655 333788 ~ 343011 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other upstream 151699 393832 ~ 397899 (-)
AMCG00006241 NA other upstream 237449 479582 ~ 562415 (-)
AMCG00006243 NA other upstream 458402 700535 ~ 701940 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 483931 726064 ~ 748736 (-)

Expression



Co-expression Network