AMCG00006221


Basic Information

Item Value
gene id AMCG00006221
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 263637 ~ 266881 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006221
TAGTCGTATTAGTAGTGTATGGAGGTTACAATCTGATGGTATGAGCGTAAGGATAAATTCCCAACAAtggcaacattgtgtttgcAGGGGTAGTAGTACAGTAACGAGTTCGTTTACAGTTCGGTCACTGTGCTGAAGAGGGCGCTATTTCACAAGCCTCAGTCCCGATTGTTGCAGCTCCGAGGGCGCAGTCGACGCGCAGCACCTCCGCCCGAGCGAGCGACCTGCGCGGCTACGCGGGGCACCATGGACCGCTCACACGGAGAATGGCGGTCGGCTGAAGTGAGCACCGGGACCACTATCATTGCAGTGCGCTACAATGGGGGGGTGGTGATTGGATCAGATTCCAGAGCTTCAATGGGAGGAACATACGTGTCGTCACGCGTGATCAACAAAGTGGTTCAGGTCAGCGACAAGATCTTCTGCTGCATGTCCGGCTCACTGGCCGACGCCCAGGCAGTCACCAACGCGGTCATCCACCAGCTCAACTTCCACAGGGACTTCTGCTATAAGTACAGAGACGAGTTGAGCGCAGGATTCATAGTGGCTGGCTGGGACTGCAAGAAAGGACCACAGGTGTTTCAGGTGTCTCTGGGTGGCACAGTGCTGGAACAGGAGTTCACTATCGGGGGCTCTGGGGGGACCTACATCTATGGCTACGCAGATGCCAAATTCCGCTCCGGGATGACCAGGGAGCAGTGCCTGACCTTCACTACCAACGCCATCGTGACAGAGGCAGGCGTGGAGAGACAGCTGATCCCTGGAAACAAACTGCCCGTCTTCCACCGCATATGA

Function

GO:

id name namespace
GO:0044424 obsolete intracellular part cellular_component
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006221 True 795 mRNA 0.56 6 263637 266881

Neighbor

gene id symbol gene type direction distance location
AMCG00006222 NA coding downstream 1205 256337 ~ 262432 (-)
AMCG00006220 NA coding downstream 21504 236326 ~ 242133 (-)
AMCG00006219 NA coding downstream 68288 181384 ~ 195349 (-)
AMCG00006214 NA coding downstream 91255 165920 ~ 172382 (-)
AMCG00006213 NA coding downstream 98119 163602 ~ 165518 (-)
AMCG00006229 NA coding upstream 20810 287691 ~ 290685 (-)
AMCG00006228 NA coding upstream 29325 296206 ~ 299137 (-)
AMCG00006227 NA coding upstream 44343 311224 ~ 321088 (-)
AMCG00006230 NA coding upstream 77894 344775 ~ 352314 (-)
AMCG00006238 NA coding upstream 241288 508169 ~ 511193 (-)
G108330 NA non-coding downstream 88444 140559 ~ 175193 (-)
G108349 NA non-coding downstream 145238 117137 ~ 118399 (-)
G108329 NA non-coding downstream 224288 33213 ~ 39349 (-)
G108323 NA non-coding downstream 242287 17554 ~ 21350 (-)
G108365 NA non-coding upstream 3875 270756 ~ 278261 (-)
G108366 NA non-coding upstream 98397 365278 ~ 368624 (-)
G108397 NA non-coding upstream 168520 435401 ~ 435621 (-)
G108427 NA non-coding upstream 318661 585542 ~ 712764 (-)
G108451 NA non-coding upstream 504230 771111 ~ 771337 (-)
G108324 NA other downstream 38496 85489 ~ 225141 (-)
G108379 NA other upstream 66907 333788 ~ 343011 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other upstream 126951 393832 ~ 397899 (-)
AMCG00006241 NA other upstream 212701 479582 ~ 562415 (-)
AMCG00006243 NA other upstream 433654 700535 ~ 701940 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 459183 726064 ~ 748736 (-)

Expression


Co-expression Network