AMCG00006230



Basic Information


Item Value
gene id AMCG00006230
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 344775 ~ 352314 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00006230
ATGACAGAGTTCCCTGAGTTTGTGACTGTGGGGATGGTGGACAATGAGCCCTTCACTTACTACGACAGCAACATCTGCAGGGAGACTCCGCGGCAGGACTGGATCGCCAAGTCTGTGGGGGCTGATTACTGGGAGAGAAACACTCAGATCTCCATCGGTGATGAGCAGACTTTCAAAGTAGATCTAGTGAATCTTCCACAGCGCTTCAACCAGACTGGAGagcCCCCCGAGGTGTCAGTGTTTCAGAAGGCCTCTCTCTCTGGGAGCTCTGAGCTGTCCTGCCTGGCCACGGGCTTCTTCCCCCGAGACGTGGTGCTGTCCTTGCAGAGAGACGGACAGGAGCTGCATGAGGGGGTGGAGAGCGGGGGGGGGACGTACCAGGTCAGGAAGAGCCTGAGGGTCTCACCTGAGGACCTGGAGGAACACACCTACACCTGCCATGTGGACCATCCCAGCCTGGGAGGGAAGTTTATCATCAAGCCatgggAGACCCCCAGCCCCGGCCCCAGCACAGTGCTGATCGCTGCAGTGGCTGTGGCCCTCATCGCCCTGGCTGTGATCGCTGTGGTGGCTCTGGTGATCGTCCGCAAGAGGAAACAACCagGAGCCCAGAAGCCCATCTACTCTCCTGCCCCAGTCCACACTGACCCACCGCAGGGCTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00006230 True 663 mRNA 0.59 5 344775 352314

Neighbor


gene id symbol gene type direction distance location
AMCG00006227 NA coding downstream 23687 311224 ~ 321088 (-)
AMCG00006228 NA coding downstream 45638 296206 ~ 299137 (-)
AMCG00006229 NA coding downstream 54090 287691 ~ 290685 (-)
AMCG00006221 NA coding downstream 77894 263637 ~ 266881 (-)
AMCG00006222 NA coding downstream 82343 256337 ~ 262432 (-)
AMCG00006238 NA coding upstream 155855 508169 ~ 511193 (-)
AMCG00006240 NA coding upstream 186885 539199 ~ 539936 (-)
AMCG00006242 NA coding upstream 313272 665586 ~ 675760 (-)
AMCG00006239 NA coding upstream 324270 676584 ~ 686559 (-)
AMCG00006244 NA coding upstream 359518 711832 ~ 720393 (-)
G108365 NA non-coding downstream 66514 270756 ~ 278261 (-)
G108330 NA non-coding downstream 169582 140559 ~ 175193 (-)
G108349 NA non-coding downstream 226376 117137 ~ 118399 (-)
G108329 NA non-coding downstream 305426 33213 ~ 39349 (-)
G108323 NA non-coding downstream 323425 17554 ~ 21350 (-)
G108366 NA non-coding upstream 12964 365278 ~ 368624 (-)
G108397 NA non-coding upstream 83087 435401 ~ 435621 (-)
G108427 NA non-coding upstream 233228 585542 ~ 712764 (-)
G108451 NA non-coding upstream 418797 771111 ~ 771337 (-)
G108461 NA non-coding upstream 459421 811735 ~ 811963 (-)
G108379 NA other downstream 1764 333788 ~ 343011 (-)
G108324 NA other downstream 119634 85489 ~ 225141 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other upstream 41518 393832 ~ 397899 (-)
AMCG00006241 NA other upstream 127268 479582 ~ 562415 (-)
AMCG00006243 NA other upstream 348221 700535 ~ 701940 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 373750 726064 ~ 748736 (-)
AMCG00006247 NA other upstream 486541 838855 ~ 874494 (-)

Expression



Co-expression Network