AMCG00006238


Basic Information

Item Value
gene id AMCG00006238
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 508169 ~ 511193 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006238
atggttttttttttcttctcagtggGGCACCAGTTTATGAGTATGGACTTCTGTATTTCAAATATCACTGAGGCAGAGAATGAGGTGGAGACAGATGGGGATGAACTGTTCTACATCGATTTTGACCGAAAGGTGGCTGTTCAGCGCCTCCCTGATTTTTCAGTCTGGGATATAGATCCAGGAGTAATTACAATGGCACTTCAGAACAGAGATGTCTGCAGACAAAACGTGGAGGGCTTTGCTAAGTGTGAGAAATATCCGCCAGAGGAGCATGACCCTCCTACAGCAGTGTTGTATCCAGAGAACCAGGTCACCCTGGGGAAGCCCAACACCCTGATCTGCTACGTCACTGATTTCCACCCTCCCGTCATCACTGTGAGGTGGACCAAGAACGAGCTGCCAGTGCACCAGGGCATCAGCCAGACCCAGTTCTACCCCAATAGGGACTACACCTACAGGGTGTTCTCCTACCTGAACACCACTCTGGAGGCCGGAGACGTGTACTCCTGCAGCGTGGAGCACCAGACTCTGGACAAGCCCCTCACCAGGATCTGGGAGCCCGAGGTGCAGGCAGAGGCCGGTGTTGGAGCGACAGCGTTCTGTGGGGCGGGTCTGAtgctggggctgctgggagTGGTGACTGGGACTTTCTTCCTCATCAAGAGCAAAAACTGCAACTGA

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006238 True 681 mRNA 0.53 3 508169 511193

Neighbor

gene id symbol gene type direction distance location
AMCG00006230 NA coding downstream 155855 344775 ~ 352314 (-)
AMCG00006227 NA coding downstream 187081 311224 ~ 321088 (-)
AMCG00006228 NA coding downstream 209032 296206 ~ 299137 (-)
AMCG00006229 NA coding downstream 217484 287691 ~ 290685 (-)
AMCG00006221 NA coding downstream 241288 263637 ~ 266881 (-)
AMCG00006240 NA coding upstream 28006 539199 ~ 539936 (-)
AMCG00006242 NA coding upstream 154393 665586 ~ 675760 (-)
AMCG00006239 NA coding upstream 165391 676584 ~ 686559 (-)
AMCG00006244 NA coding upstream 200639 711832 ~ 720393 (-)
AMCG00006248 rxrba,rxrb,LOC107729870,LOC107566635,LOC107751683 coding upstream 263281 774474 ~ 785585 (-)
G108397 NA non-coding downstream 72548 435401 ~ 435621 (-)
G108366 NA non-coding downstream 139545 365278 ~ 368624 (-)
G108365 NA non-coding downstream 229908 270756 ~ 278261 (-)
G108330 NA non-coding downstream 332976 140559 ~ 175193 (-)
G108349 NA non-coding downstream 389770 117137 ~ 118399 (-)
G108427 NA non-coding upstream 74349 585542 ~ 712764 (-)
G108451 NA non-coding upstream 259918 771111 ~ 771337 (-)
G108461 NA non-coding upstream 300542 811735 ~ 811963 (-)
G108478 NA non-coding upstream 341091 852284 ~ 855672 (-)
G108480 NA non-coding upstream 346601 857794 ~ 858315 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other downstream 110270 393832 ~ 397899 (-)
G108379 NA other downstream 165158 333788 ~ 343011 (-)
G108324 NA other downstream 283028 85489 ~ 225141 (-)
AMCG00006243 NA other upstream 189342 700535 ~ 701940 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 214871 726064 ~ 748736 (-)
AMCG00006247 NA other upstream 327662 838855 ~ 874494 (-)
G108708 NA other upstream 615369 1126562 ~ 1134690 (-)
AMCG00006266 NA other upstream 623708 1134901 ~ 1137952 (-)

Expression


Co-expression Network