AMCG00006244


Basic Information

Item Value
gene id AMCG00006244
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 711832 ~ 720393 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006244
GCCCCCGCGGGGAGCGTGGAGAGAAGGGAGAGGCGGGACAGCCGGGAGCAGCCGGCCCGGCAGGAGGGAAGGGGCCGGTTGGAGACGATGGGCCCAAAGGAAACCCTggcCCAGTTGGTTTTCCTGGTGACCCCGGACCCCCTGGTGAACAAGGTCCCAGAgGTCAAGATGGAgcgaagggagagagaggagaggatggAGAACAGGGACAAGCGggttcTCCAGGACCCACCGGTGAAGCTGGTCCCCCAGGACCCCCTGGAAAGAGGgGTCCTGCTGGAACGAGAGGGTCCTCCAGGGCTGCCGGGGCTGCGCGGAGACCCGGGTTCGAAGGGAGAGAAGGGACACCCTGGTCTGATCGGCCTGATTGGACCTACTGGGGAGCAGGGCGAGAAGGGCGACAGGGGCCTGCCGGGGCCACAGGGCAACACCGGGCCCAAGGGAGACACCggTTTCGCTGGATCCACTGGGCCCCTGGGCCCCTCTGGCCCCCCTGGCCTGCCTggtccTCCTGGTCTTAAAGGTGCTAAGGGAGCTACGggTTCTGCTGGTCCCAAAGGAGAGAAAGGTGTGCAGGGACCTCCTGGGCCTCCTggtccTCCAGGTGAGGCGATCCAGCCGCTGCCCTTCCAGATGCCCAAGAAGTCGAAGCGCTCCATCGACGCCAGTCAGTTCGAGGAGGCGGAGTCCCGGGCTGAGACGCAGGCCGATTGGGCGTCGGACTGGTTCTCGTATGTGGACAACGAGGGCGGGCCGGTGGGTGTGGTCCAGATGACGTTCCTGCGGCTCCTGAGCGCCTCGGCGCGCCAGACCTTCACCTACAGCTGCCACCGCTCCATCGCCTGGCAACAGCACAGCGCCCCCGGCGACTACTCGCGCGCCCTGCGCTTCCTGGGCGCCAACGAGGAGGAGCTGAGCCACGACACCAGCGCCTACGTCAAGGCCCTGAGCGACGGCTGCTCTctccccctgctggaTGTGCAGGTCTCAGACTTTGGGGAACAATACCAGAAATTCGGCTTCGAACTGGGACCTGTCTGTTTCCTGGGCTga

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006244 True 1053 mRNA 0.66 12 711832 720393

Neighbor

gene id symbol gene type direction distance location
AMCG00006239 NA coding downstream 25273 676584 ~ 686559 (-)
AMCG00006242 NA coding downstream 36072 665586 ~ 675760 (-)
AMCG00006240 NA coding downstream 171896 539199 ~ 539936 (-)
AMCG00006238 NA coding downstream 200639 508169 ~ 511193 (-)
AMCG00006230 NA coding downstream 359518 344775 ~ 352314 (-)
AMCG00006248 rxrba,rxrb,LOC107729870,LOC107566635,LOC107751683 coding upstream 54081 774474 ~ 785585 (-)
AMCG00006255 NA coding upstream 176585 896978 ~ 900845 (-)
AMCG00006259 NA coding upstream 322469 1042862 ~ 1047510 (-)
AMCG00006260 NA coding upstream 327785 1048178 ~ 1049728 (-)
AMCG00006258 psb7,LOC106569939,LOC106588382 coding upstream 347661 1068054 ~ 1073294 (-)
G108397 NA non-coding downstream 276211 435401 ~ 435621 (-)
G108366 NA non-coding downstream 343208 365278 ~ 368624 (-)
G108365 NA non-coding downstream 433571 270756 ~ 278261 (-)
G108330 NA non-coding downstream 536639 140559 ~ 175193 (-)
G108349 NA non-coding downstream 593433 117137 ~ 118399 (-)
G108451 NA non-coding upstream 50718 771111 ~ 771337 (-)
G108461 NA non-coding upstream 91342 811735 ~ 811963 (-)
G108478 NA non-coding upstream 131891 852284 ~ 855672 (-)
G108480 NA non-coding upstream 137401 857794 ~ 858315 (-)
G108484 NA non-coding upstream 168680 889073 ~ 889802 (-)
AMCG00006243 NA other downstream 9892 700535 ~ 701940 (-)
AMCG00006241 NA other downstream 149417 479582 ~ 562415 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other downstream 313933 393832 ~ 397899 (-)
G108379 NA other downstream 368821 333788 ~ 343011 (-)
G108324 NA other downstream 486691 85489 ~ 225141 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other upstream 5671 726064 ~ 748736 (-)
AMCG00006247 NA other upstream 118462 838855 ~ 874494 (-)
G108708 NA other upstream 406169 1126562 ~ 1134690 (-)
AMCG00006266 NA other upstream 414508 1134901 ~ 1137952 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other upstream 490893 1211286 ~ 1216184 (-)

Expression


Co-expression Network