AMCG00006260


Basic Information

Item Value
gene id AMCG00006260
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1048178 ~ 1049728 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006260
ggagcCTCACTCTGTGTCAGTGAGTGGTCAGCAGTCCAGTGTGTCTCTGACCTCTCTGACCCCAGGGTCTACCTACAAGtcCCTGACCCACCCTCTGACCTGCGTGTCGTCAATGTCACGGACTCCAGGGCCCTGTTGCTGTGGCGCCCTGCCCTGGTCAATGTTGACCGTTACGTCATCGTTTACAGAGCCCAGGATGagcctGAGGTGTCAGTCAGTAGTTCGGGTAACTCAGTGGAGCTGCAGCTGAAGGGTCTGCAGGGAGAGACATTGTACAGCGTCACGGTGACCAGCCTCAGGGGCAGAGAGCACAGCCCCCCCGCCTCCACCTCCTTCACCACGGCATCTGggGTGGTGGCCAGAGGGGAGGAGCCCCGCGACCTGACAGCCAATCAGGTGAAGCCACGGTCTGCCATGCTGTCGTGGAAACCGCCACATACCGCGGTATCGGGGTACTGGCTGACCTATCAGACGGACAGACAGGAAACACAggtgaaagagagacagagacagagaaagagagagagatattgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006260 True 534 mRNA 0.59 4 1048178 1049728

Neighbor

gene id symbol gene type direction distance location
AMCG00006259 NA coding downstream 668 1042862 ~ 1047510 (-)
AMCG00006255 NA coding downstream 147333 896978 ~ 900845 (-)
AMCG00006248 rxrba,rxrb,LOC107729870,LOC107566635,LOC107751683 coding downstream 262593 774474 ~ 785585 (-)
AMCG00006244 NA coding downstream 327785 711832 ~ 720393 (-)
AMCG00006239 NA coding downstream 361619 676584 ~ 686559 (-)
AMCG00006258 psb7,LOC106569939,LOC106588382 coding upstream 18326 1068054 ~ 1073294 (-)
AMCG00006265 NA coding upstream 106999 1156727 ~ 1160200 (-)
AMCG00006268 rnf5,LOC107694772 coding upstream 113572 1163300 ~ 1170846 (-)
AMCG00006267 NA coding upstream 121953 1171681 ~ 1179064 (-)
AMCG00006271 NA coding upstream 131982 1181710 ~ 1191081 (-)
G108664 NA non-coding downstream 89500 953292 ~ 958678 (-)
G108655 NA non-coding downstream 114353 933515 ~ 933825 (-)
G108491 NA non-coding downstream 139150 907890 ~ 909028 (-)
G108484 NA non-coding downstream 158376 889073 ~ 889802 (-)
G108480 NA non-coding downstream 189863 857794 ~ 858315 (-)
G108705 NA non-coding upstream 59923 1109651 ~ 1119698 (-)
G108717 NA non-coding upstream 130854 1180582 ~ 1201681 (-)
G108682 NA non-coding upstream 242310 1292038 ~ 1306880 (-)
G108750 NA non-coding upstream 270970 1320698 ~ 1321213 (-)
G108752 NA non-coding upstream 279074 1328802 ~ 1332044 (-)
AMCG00006247 NA other downstream 173684 838855 ~ 874494 (-)
AMCG00006245 LOC106569953,LOC106588396,LOC107101422,LOC107103722 other downstream 299442 726064 ~ 748736 (-)
AMCG00006243 NA other downstream 346238 700535 ~ 701940 (-)
AMCG00006241 NA other downstream 485763 479582 ~ 562415 (-)
AMCG00006232 LOC107694105,LOC107737194,LOC107751684,LOC107575376 other downstream 650279 393832 ~ 397899 (-)
G108708 NA other upstream 76834 1126562 ~ 1134690 (-)
AMCG00006266 NA other upstream 85173 1134901 ~ 1137952 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other upstream 161558 1211286 ~ 1216184 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other upstream 287459 1337187 ~ 1341665 (-)
AMCG00006292 NA other upstream 294788 1344516 ~ 1637731 (-)

Expression


Co-expression Network