Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006265 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 1156727 ~ 1160200 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006265 | True | 1175 | mRNA | 0.50 | 3 | 1156727 | 1160200 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006258 | psb7,LOC106569939,LOC106588382 | coding | downstream | 83433 | 1068054 ~ 1073294 (-) |
| AMCG00006260 | NA | coding | downstream | 106999 | 1048178 ~ 1049728 (-) |
| AMCG00006259 | NA | coding | downstream | 109217 | 1042862 ~ 1047510 (-) |
| AMCG00006255 | NA | coding | downstream | 255882 | 896978 ~ 900845 (-) |
| AMCG00006248 | rxrba,rxrb,LOC107729870,LOC107566635,LOC107751683 | coding | downstream | 371142 | 774474 ~ 785585 (-) |
| AMCG00006268 | rnf5,LOC107694772 | coding | upstream | 3100 | 1163300 ~ 1170846 (-) |
| AMCG00006267 | NA | coding | upstream | 11481 | 1171681 ~ 1179064 (-) |
| AMCG00006271 | NA | coding | upstream | 21510 | 1181710 ~ 1191081 (-) |
| AMCG00006272 | NA | coding | upstream | 33070 | 1193270 ~ 1199994 (-) |
| AMCG00006273 | NA | coding | upstream | 87942 | 1248142 ~ 1261579 (-) |
| G108705 | NA | non-coding | downstream | 37029 | 1109651 ~ 1119698 (-) |
| G108689 | NA | non-coding | downstream | 55435 | 1040218 ~ 1101292 (-) |
| G108664 | NA | non-coding | downstream | 198049 | 953292 ~ 958678 (-) |
| G108655 | NA | non-coding | downstream | 222902 | 933515 ~ 933825 (-) |
| G108491 | NA | non-coding | downstream | 247699 | 907890 ~ 909028 (-) |
| G108717 | NA | non-coding | upstream | 20382 | 1180582 ~ 1201681 (-) |
| G108682 | NA | non-coding | upstream | 131838 | 1292038 ~ 1306880 (-) |
| G108750 | NA | non-coding | upstream | 160498 | 1320698 ~ 1321213 (-) |
| G108752 | NA | non-coding | upstream | 168602 | 1328802 ~ 1332044 (-) |
| G108756 | NA | non-coding | upstream | 189885 | 1350085 ~ 1397331 (-) |
| AMCG00006266 | NA | other | downstream | 18775 | 1134901 ~ 1137952 (-) |
| G108708 | NA | other | downstream | 22037 | 1126562 ~ 1134690 (-) |
| AMCG00006247 | NA | other | downstream | 282233 | 838855 ~ 874494 (-) |
| AMCG00006245 | LOC106569953,LOC106588396,LOC107101422,LOC107103722 | other | downstream | 407991 | 726064 ~ 748736 (-) |
| AMCG00006243 | NA | other | downstream | 454787 | 700535 ~ 701940 (-) |
| AMCG00006274 | zbtb12,LOC106570057,LOC106588515 | other | upstream | 51086 | 1211286 ~ 1216184 (-) |
| AMCG00006277 | prrt1,LOC108272790,LOC107694357 | other | upstream | 176987 | 1337187 ~ 1341665 (-) |
| AMCG00006292 | NA | other | upstream | 184316 | 1344516 ~ 1637731 (-) |
| G108755 | NA | other | upstream | 190285 | 1350485 ~ 1554664 (-) |
| AMCG00006279 | NA | other | upstream | 198197 | 1358397 ~ 1510540 (-) |
