AMCG00006269


Basic Information

Item Value
gene id AMCG00006269
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1265532 ~ 1272008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006269
ACCCCCTCAGACCCACTGTGACAGCGCTCCTCTCCACGCAGCTGTCCACCATGATCGCCGTGCTGTGGTGTCTGGCCTTCGCCACCACTGTCGCCCCTCTTTCCTCCTCCCCGttCTACACGCGGAACTACGTGGGTTTCTACTCGGGGAGGAATTGGTACTCCTacctaGAGTGCAGTAGTAATGGGCTGTCAATCTCCGGCggctccatctccctctctaaTGGCTACAAGGTGAACAGTCTGCTGACCTACAACTGTCCCGCTGACCACTACGCTTACCCCGACCTGATGCTCCGGTGTCGGACTGACGGGAAGTGGACCCCCAGGCCCAGCAGGAACGCGCAGTGCAAAGAGAGAATGTGTCTGGAGAATCAACAGTGGACTGGGGCCGAGCCGGCCTGCTACTACAAATACACCTATGACAGCCCAGAGGAGGCTGCCAAGGCCTTCACGTCCTCCCTGGGGAACCTGCTACATGAGTCTGGACAGGACATTGGTGACGAGCAGTATGGGAAGAAGATCCGGCTGGACCGGGGTGGGAAGCTGAATATCTATGTTGCCATGGACGCATCCCAAAGCCTGGATGAGAAGGAGTTTGAGAAGTCCAAAGCCTGCATCCTGGCGCTAATACAAAACATCAGTTATTTCGAAGTCACCCCCAAATACGACATCCTTTCTTTTGCCACCTTCGTCAAGGACATTGTTAACATCACCGAGCCCCAGCTTGAGAGTGACAGGGAGTCATATCTGGATATTTATGCATTCAGTGTGGGTTCAGATCCTCAAGAGGAAGAGCTTCTCAAGCTGGTGTCGCAGAAACCCGAGGAAAAGCACTTTTTCAAACTGGAAAATATAAACGATCTGCACAAGACTTTTGCTTTAATGATA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006269 True 890 mRNA 0.53 9 1265532 1272008

Neighbor

gene id symbol gene type direction distance location
AMCG00006270 NA coding upstream 52438 1199821 ~ 1213094 (+)
AMCG00006263 NA coding upstream 117619 1143777 ~ 1147913 (+)
AMCG00006264 NA coding upstream 157816 1102780 ~ 1107716 (+)
AMCG00006262 NA coding upstream 166761 1089591 ~ 1098771 (+)
AMCG00006261 NA coding upstream 179545 1077293 ~ 1085987 (+)
AMCG00006282 NA coding downstream 88602 1360610 ~ 1415163 (+)
AMCG00006281 NA coding downstream 152399 1424407 ~ 1433866 (+)
AMCG00006287 NA coding downstream 264899 1536907 ~ 1545850 (+)
AMCG00006286 NA coding downstream 301120 1573128 ~ 1574818 (+)
AMCG00006288 NA coding downstream 366051 1638059 ~ 1647130 (+)
G108555 NA non-coding upstream 44108 1217879 ~ 1221424 (+)
G108540 NA non-coding upstream 63851 1201294 ~ 1201681 (+)
G108519 NA non-coding upstream 72091 1162864 ~ 1193441 (+)
G108516 NA non-coding upstream 193760 1071294 ~ 1071772 (+)
G108515 NA non-coding upstream 194761 1070327 ~ 1070771 (+)
G108580 NA non-coding downstream 71544 1343552 ~ 1343755 (+)
G108584 NA non-coding downstream 78043 1350051 ~ 1397427 (+)
G108587 NA non-coding downstream 80810 1352818 ~ 1554665 (+)
G108595 NA non-coding downstream 201364 1473372 ~ 1474967 (+)
G108602 NA non-coding downstream 215304 1487312 ~ 1487870 (+)
AMCG00006256 NA other upstream 261661 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 409812 846561 ~ 855720 (+)
G108319 NA other upstream 474470 774809 ~ 791062 (+)
AMCG00006236 NA other upstream 613392 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 831627 426976 ~ 433905 (+)
AMCG00006276 NA other downstream 6452 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 14821 1286829 ~ 1315558 (+)
G108585 NA other downstream 78375 1350383 ~ 1429987 (+)
G108626 rps5,LOC107086176 other downstream 365389 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 463924 1735932 ~ 1741336 (+)

Expression


Co-expression Network