AMCG00006270


Basic Information

Item Value
gene id AMCG00006270
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1199821 ~ 1213094 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006270
ATGGCTCTCTGTATCGCTGCCCTGCTGGGCCCCGGGGGCAGAGCGCTGGGACAGACCAGCTGGCCGTTGGGCAGGACCACTGAGGGCCCAACGCTGTCCACAGCATCTCCTGGGAAGTCGCAGCAGATCCCTTTAATAAAGTCTGTGAAGGGGGAACCCACACGGGACGGACCCTCCAACGGAAAGAGGGCGGGACCCGCTGCCGTCAAGAGCTCCGTGGACCAATCAGGAGCAGGAGAGGACATGGATGCTACAGACACCATGGGTGCCTTGGGTGGCAAGACGTCGTCACAGAAGGAGAAGGCGGAGGCAGAGGAGGGCGAGAAAGAAGGGAGcaagggaggggaggagggagagaagactGCCACCCCCACTGCCATGCCTAGTGCCTCCGCCGGGAAAGGACTGCTGGgacACGCTGCAAAgaccctcccctcctcctccttctcctcctcctcctcttcctcctctcctggCCGTGCGAAGATGAGTGTGTCCGGTCAGGGAAAGCCCGTCCTCTCGGCCCccactccctcactccctccctcttcctcccctgGCCCCTCCACTGCCGCTGCCCCCCCGGCCAAGATCCACAGAGCCAGGAAGACCATGAACAGAGCCCCCCCAGCCCAGAGCTCTGGGTCGGATCAGAGGAAGAGGGACATGCCCCGGAGGAAGAGCCGCAGTGAGAGCCCCTGGGTCAGACCCTCCCGGCgcaggaagaggagagagcgagcgagggagagaccagGAGCTGCAGGCCCCAGTGTGTCGTCCAGCTACACGGAGGTCCCTCTGGGGTCGCTGGACATCGCCACCCCAGACAGCCTGTCTCCACGCCAACACAGTGAGtttgtgtccctctctctggggCTGGAGTGTGCGAGTGCTCACGCGTATGTTGTGTCGGTACGTACGGTGCACAAGGTGTTGCTGCTTCAGCGTCACGCCGTCGCCATTGGACAGAGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006270 True 975 mRNA 0.64 8 1199821 1213094

Neighbor

gene id symbol gene type direction distance location
AMCG00006263 NA coding upstream 51908 1143777 ~ 1147913 (+)
AMCG00006264 NA coding upstream 92105 1102780 ~ 1107716 (+)
AMCG00006262 NA coding upstream 101050 1089591 ~ 1098771 (+)
AMCG00006261 NA coding upstream 113834 1077293 ~ 1085987 (+)
AMCG00006257 NA coding upstream 160541 1026203 ~ 1039280 (+)
AMCG00006269 NA coding downstream 52438 1265532 ~ 1272008 (+)
AMCG00006282 NA coding downstream 147516 1360610 ~ 1415163 (+)
AMCG00006281 NA coding downstream 211313 1424407 ~ 1433866 (+)
AMCG00006287 NA coding downstream 323813 1536907 ~ 1545850 (+)
AMCG00006286 NA coding downstream 360034 1573128 ~ 1574818 (+)
G108519 NA non-coding upstream 6380 1162864 ~ 1193441 (+)
G108516 NA non-coding upstream 128049 1071294 ~ 1071772 (+)
G108515 NA non-coding upstream 129050 1070327 ~ 1070771 (+)
G108513 NA non-coding upstream 132096 1067036 ~ 1067725 (+)
G108496 NA non-coding upstream 265996 933515 ~ 933825 (+)
G108555 NA non-coding downstream 4785 1217879 ~ 1221424 (+)
G108580 NA non-coding downstream 130458 1343552 ~ 1343755 (+)
G108584 NA non-coding downstream 136957 1350051 ~ 1397427 (+)
G108587 NA non-coding downstream 139724 1352818 ~ 1554665 (+)
G108595 NA non-coding downstream 260278 1473372 ~ 1474967 (+)
AMCG00006256 NA other upstream 195950 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 344101 846561 ~ 855720 (+)
G108319 NA other upstream 408759 774809 ~ 791062 (+)
AMCG00006236 NA other upstream 547681 644718 ~ 652140 (+)
AMCG00006231 NA other upstream 765916 426976 ~ 433905 (+)
AMCG00006276 NA other downstream 65366 1278460 ~ 1286052 (+)
AMCG00006275 NA other downstream 73735 1286829 ~ 1315558 (+)
G108585 NA other downstream 137289 1350383 ~ 1429987 (+)
G108626 rps5,LOC107086176 other downstream 424303 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 522838 1735932 ~ 1741336 (+)

Expression


Co-expression Network