Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006280 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 1293396 ~ 1297970 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006280 | True | 408 | mRNA | 0.61 | 5 | 1293396 | 1297970 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006273 | NA | coding | downstream | 31817 | 1248142 ~ 1261579 (-) |
| AMCG00006272 | NA | coding | downstream | 93402 | 1193270 ~ 1199994 (-) |
| AMCG00006271 | NA | coding | downstream | 102315 | 1181710 ~ 1191081 (-) |
| AMCG00006267 | NA | coding | downstream | 114332 | 1171681 ~ 1179064 (-) |
| AMCG00006268 | rnf5,LOC107694772 | coding | downstream | 122550 | 1163300 ~ 1170846 (-) |
| AMCG00006278 | nelfe | coding | upstream | 867 | 1298837 ~ 1300643 (-) |
| AMCG00006285 | NA | coding | upstream | 196390 | 1494360 ~ 1498054 (-) |
| AMCG00006283 | NA | coding | upstream | 252473 | 1550443 ~ 1555554 (-) |
| AMCG00006291 | NA | coding | upstream | 297702 | 1595672 ~ 1599457 (-) |
| AMCG00006290 | NA | coding | upstream | 380292 | 1678262 ~ 1683356 (-) |
| G108717 | NA | non-coding | downstream | 91715 | 1180582 ~ 1201681 (-) |
| G108705 | NA | non-coding | downstream | 173698 | 1109651 ~ 1119698 (-) |
| G108689 | NA | non-coding | downstream | 192104 | 1040218 ~ 1101292 (-) |
| G108664 | NA | non-coding | downstream | 334718 | 953292 ~ 958678 (-) |
| G108655 | NA | non-coding | downstream | 359571 | 933515 ~ 933825 (-) |
| G108750 | NA | non-coding | upstream | 22728 | 1320698 ~ 1321213 (-) |
| G108752 | NA | non-coding | upstream | 30832 | 1328802 ~ 1332044 (-) |
| G108756 | NA | non-coding | upstream | 52115 | 1350085 ~ 1397331 (-) |
| G108760 | NA | non-coding | upstream | 107423 | 1405393 ~ 1409747 (-) |
| G108770 | NA | non-coding | upstream | 206228 | 1504198 ~ 1560390 (-) |
| AMCG00006274 | zbtb12,LOC106570057,LOC106588515 | other | downstream | 77212 | 1211286 ~ 1216184 (-) |
| AMCG00006266 | NA | other | downstream | 155444 | 1134901 ~ 1137952 (-) |
| G108708 | NA | other | downstream | 158706 | 1126562 ~ 1134690 (-) |
| AMCG00006247 | NA | other | downstream | 418902 | 838855 ~ 874494 (-) |
| AMCG00006245 | LOC106569953,LOC106588396,LOC107101422,LOC107103722 | other | downstream | 544660 | 726064 ~ 748736 (-) |
| AMCG00006277 | prrt1,LOC108272790,LOC107694357 | other | upstream | 39217 | 1337187 ~ 1341665 (-) |
| AMCG00006292 | NA | other | upstream | 46546 | 1344516 ~ 1637731 (-) |
| G108755 | NA | other | upstream | 52515 | 1350485 ~ 1554664 (-) |
| AMCG00006279 | NA | other | upstream | 60427 | 1358397 ~ 1510540 (-) |
| AMCG00006284 | prrc2a | other | upstream | 175508 | 1473478 ~ 1493970 (-) |
