AMCG00006283


Basic Information

Item Value
gene id AMCG00006283
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1550443 ~ 1555554 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006283
CCTCTCTCTGGCTCACGCTGAGCAGCAGCAGTTCTGCTGGTTGCTGAAGGTGTGTCCCTGAAATGAGGtctcctctctttcctctcctcatctctctctcctgtctctctgaaTGGGCTCAGAGGTTGGGAGTGGAAGTCACTGCCAGTCCATCCGAGAATCTGAAGAGCGGAGACAGAATCACTCTGCGCTGTGGGCTGGACTGTGGGGGGGGCGCTGGAAGCTGCTCTGAGGCCCCACAGGGATTGACTCTGACCTGGAGGGACGAGAGTGGCGCCCCACTGAAGGACAGGCGAGACAGATACGAAATCAAGACCCTCGCAAATCGCAGTCACCTCTCAGTGAGTTTGCAGAGATCAGACCACTACAGACTCTGGGTCTGTGCGCTGGCAGAGGGAGGCAGGGTTGAGACCTGTGGAAACTATACCACAAAACTCTCAGACTTCATCCGGGAGGTGTACATCAGACTGGGAGATTTCCTACAGCTGCCCTGCCTGGAGTCTGTGCATCTGGGACCAGGAGAGATACTGCAGTGGCTCGTCAATAAAGCAGATACCATTAATTATGAGACCCTGTACACACTGTCAGAGGACGGACAGATCACTACAGCGATGGAGGTGAACCCTGAGAGGCTGGAGATGACAGTCAGCTCCTCACTGTTGATACGCAGTGTCCAGGCCCAGGACAGTGGCGTCTATTTGTGCTGCTTCAATGAGGAGACCCATGAGGTTTATTATCTGAACACAATATGGGTGAGTTCAGACCACACCGGGGAGGTAAAGAGGGGCTCCAACATCACCCTGACCTGCACCCTCACCTGTGGGCGGATTTATGGAAATATCAGCAACACACTTGTCTGGAGGGACAGTACAGGACACAGCCTGCAGGGGGGCACTACTGAGCAAATGAACAACAAGTTTATCTCCCGGCTGCTGGTCCCTGAGCTGCAGAGCTCTGAGAGGATCTGGTGCAGCGTGGTCAGAGAGGGGCTGGAGAGGGTGGAGCAGGACATTACCATTGTGGTAACAGATCCTCAGGGTTCAGCACTGTCATTAGTGGAGCTGGCGGTGAGACTCACTGTGTTCTTCATCGCTCTCTTTGTCCCTCTGGTCGCTGTAGCCGTGGTTTACACCaagaggaggagcagcagacagacagAGGAAGAAGAAACCAACATAGAACTGGTCTCCCGTGACTGATGTCCTGTCCACCCCTAACGACTCCCCGTCTCTCCCAGTGCTGAGAGAGAACAGTTCCTggacgtttttgtttttagttattgttcatttttgcattgtattattttccatcAATTATGCATTTGTCCCAATGGAACACAttccacattttaaatagtttttttcattgatttgtaattaaatgtgtacaGATATGTATAATTTTCATGAATTCCTGGTTATGAAACTGTGCTAGTCACTCCAGAAATATATGAATCTGTTAAATATCTCTTTAAGCCTACCtattcaccaccagaggtcatcttCACCTGAATACTAACCatgcaatcatccaattaacattccagcataccatgtgcacttgtcccAATAACCCTCTGCACTCATTGGTTCTACCTCTTCCCACCAGACTCCACTCTGCCCTGCATTTAAACCCCTAAGTCTTGTCTTATTCATTGAAGTATTTCTAAGCATTACCTCTGGTTATTTACTTTCCTGTGGGCCTTTGGATTGCCTGTTTGCCCTATCTATTGACCCCTCGACTGTCTTTGAACCTTGTCTCTCAGATATCCCTTTTGCATTGTTAGCCTTGCTTCCTCTGTTGGTGAGCTTGCCCTTGGGTTCACCTCTGGTGTCCTCAGGGACATAACCTTTCCACCCAGCTTTTGGGTTGAGATATACacctgtggaaggaaagttagaaattatactaatacctgtttttctctcttgtaatcttaagaaagataaggtcaggccagaaggtagtttgatctctgtttgttatttacgatgagaatgTTGGAggcaatgtcaaacagtatgattgaagtgcctgctccctaatccatatGTTGATCTGTGAACTCTGTATAATGAtgatattctgcttagctaactttTTAGATAACCtagtaatgact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006283 True 2122 mRNA 0.48 6 1550443 1555554

Neighbor

gene id symbol gene type direction distance location
AMCG00006285 NA coding downstream 52389 1494360 ~ 1498054 (-)
AMCG00006278 nelfe coding downstream 249800 1298837 ~ 1300643 (-)
AMCG00006280 NA coding downstream 252473 1293396 ~ 1297970 (-)
AMCG00006273 NA coding downstream 288864 1248142 ~ 1261579 (-)
AMCG00006272 NA coding downstream 350449 1193270 ~ 1199994 (-)
AMCG00006291 NA coding upstream 40118 1595672 ~ 1599457 (-)
AMCG00006290 NA coding upstream 122708 1678262 ~ 1683356 (-)
AMCG00006299 NA coding upstream 137689 1693243 ~ 1709505 (-)
AMCG00006304 rps5,LOC106570065 coding upstream 253102 1808656 ~ 1818368 (-)
AMCG00006305 NA coding upstream 311005 1866559 ~ 1870731 (-)
G108772 NA non-coding downstream 8082 1536944 ~ 1542361 (-)
G108760 NA non-coding downstream 140696 1405393 ~ 1409747 (-)
G108756 NA non-coding downstream 153112 1350085 ~ 1397331 (-)
G108752 NA non-coding downstream 218399 1328802 ~ 1332044 (-)
G108750 NA non-coding downstream 229230 1320698 ~ 1321213 (-)
G108790 NA non-coding upstream 106199 1661753 ~ 1663033 (-)
G108791 NA non-coding upstream 109394 1664948 ~ 1670631 (-)
G108789 NA non-coding upstream 164075 1719629 ~ 1721131 (-)
G108805 NA non-coding upstream 178641 1734195 ~ 1783566 (-)
G108834 NA non-coding upstream 330411 1885965 ~ 1886276 (-)
AMCG00006279 NA other downstream 39903 1358397 ~ 1510540 (-)
AMCG00006284 prrc2a other downstream 56473 1473478 ~ 1493970 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other downstream 208778 1337187 ~ 1341665 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other downstream 334259 1211286 ~ 1216184 (-)
AMCG00006266 NA other downstream 412491 1134901 ~ 1137952 (-)
G108784 NA other upstream 90926 1646480 ~ 1660004 (-)
AMCG00006298 NA other upstream 167007 1722561 ~ 1724848 (-)
G108829 NA other upstream 325728 1881282 ~ 1881837 (-)
AMCG00006313 NA other upstream 464447 2020001 ~ 2024143 (-)
G108938 NA other upstream 542264 2097818 ~ 2130255 (-)

Expression


Co-expression Network