AMCG00006285


Basic Information

Item Value
gene id AMCG00006285
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1494360 ~ 1498054 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006285
GGAGGAAAAGCCTTTGGGCTCCTCAAAGCCCAACAGGAGGAGAAACTACAGGCTATTAACAAGGAGCTTCTTGACGATCCCAAATATGTAGACGTAGAAGAACTTGAATCTAAACTGGAGTCTTTTAAACAAAAGTACATGGAGTTTGACCTGAATGACCAGGGAGAAATAGACATGATGGGGTTAAAGAGGATGCTGGAGAAACTGGGTGTGGCCAAGACTCACCTGGAGTTGAAGAAGATGATGACAGAGGTGACGGGAGGAGCCACCGAGAACATCAACTACAGGGACTTCCTGAGCATGATGCTGGGCAAGAGATCAGCTATCCTCAGACTGATCTTGATGTTTGAGGACAAGGCAAAGGACTCAGAAGTGAAACCCAGCGGCCCTCCCCCCCGCAAGACATTCTCTGACCTCCCCTGACCCTATCCCAGCATGCAATGGGCACAAACACAGCCCCATTCAATCCCAGTCtgctgacagacacacaaaaagacaaacagacagacaccaaGACATAGATGCACatgaacacacatacagacatagaAACACACGCaccacatacagacacacaaagacatcgAGGCCcacccacagagacacacagacggtacagacaggcagacacacacaaacagtataCCCTACCATTTGCACTTTTGTAACTGACCCTACAAATAGTGTGATCCAGTATTATTGCCTGATTCTAAATATACATTGAATAGAGGACAGTGCTGAGttaattgtatacatatatattatatataactttgAATACAGTATACCATATTCATACAACTTGTACCATCATGTCAGCACCCATTCTTCCTaatgaggaagaaaaaacacaataaattcAGGGAAAGGGGAAGTAAACATTAGCATGATGCACTACCTAGTGTTATACCGGGGTTGTGCTGTACCGTGGCAGTGTGTTGTAAACAGCTATCTGGGCCGTTGAATAAACCATTGACTGAAACACTGTCAGATA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K18617 AIF1; allograft inflammatory factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006285 True 994 mRNA 0.44 5 1494360 1498054

Neighbor

gene id symbol gene type direction distance location
AMCG00006278 nelfe coding downstream 193717 1298837 ~ 1300643 (-)
AMCG00006280 NA coding downstream 196390 1293396 ~ 1297970 (-)
AMCG00006273 NA coding downstream 232781 1248142 ~ 1261579 (-)
AMCG00006272 NA coding downstream 294366 1193270 ~ 1199994 (-)
AMCG00006271 NA coding downstream 303279 1181710 ~ 1191081 (-)
AMCG00006283 NA coding upstream 52389 1550443 ~ 1555554 (-)
AMCG00006291 NA coding upstream 97618 1595672 ~ 1599457 (-)
AMCG00006290 NA coding upstream 180208 1678262 ~ 1683356 (-)
AMCG00006299 NA coding upstream 195189 1693243 ~ 1709505 (-)
AMCG00006304 rps5,LOC106570065 coding upstream 310602 1808656 ~ 1818368 (-)
G108760 NA non-coding downstream 84613 1405393 ~ 1409747 (-)
G108756 NA non-coding downstream 97029 1350085 ~ 1397331 (-)
G108752 NA non-coding downstream 162316 1328802 ~ 1332044 (-)
G108750 NA non-coding downstream 173147 1320698 ~ 1321213 (-)
G108682 NA non-coding downstream 187480 1292038 ~ 1306880 (-)
G108770 NA non-coding upstream 6144 1504198 ~ 1560390 (-)
G108772 NA non-coding upstream 38890 1536944 ~ 1542361 (-)
G108790 NA non-coding upstream 163699 1661753 ~ 1663033 (-)
G108791 NA non-coding upstream 166894 1664948 ~ 1670631 (-)
G108789 NA non-coding upstream 221575 1719629 ~ 1721131 (-)
AMCG00006284 prrc2a other downstream 390 1473478 ~ 1493970 (-)
AMCG00006277 prrt1,LOC108272790,LOC107694357 other downstream 152695 1337187 ~ 1341665 (-)
AMCG00006274 zbtb12,LOC106570057,LOC106588515 other downstream 278176 1211286 ~ 1216184 (-)
AMCG00006266 NA other downstream 356408 1134901 ~ 1137952 (-)
G108708 NA other downstream 359670 1126562 ~ 1134690 (-)
G108784 NA other upstream 148426 1646480 ~ 1660004 (-)
AMCG00006298 NA other upstream 224507 1722561 ~ 1724848 (-)
G108829 NA other upstream 383228 1881282 ~ 1881837 (-)
AMCG00006313 NA other upstream 521947 2020001 ~ 2024143 (-)
G108938 NA other upstream 599764 2097818 ~ 2130255 (-)

Expression


Co-expression Network