AMCG00006286


Basic Information

Item Value
gene id AMCG00006286
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1573128 ~ 1574818 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006286
atggGGCTCCACGGTGTCCCTCACTGCTCGACACTCATGATTCATTACTGTGTCTCTCTTGCAGGTGTCGCTGTGTTCTCCACTGTAGGGGGCAGTGCTGCTCTGCGCTGTGGGACAGTGATCTATACAAACTGCTCTTCAACTACATGGAACTTTAACAGTGGATCTCAAACAACTGTTGAGCTGGTGGGTCTTGGGAAGGTGAATAATGACAGTCCAGAGAGAGCTGGGAGACTGAGTGTGGGGTCTGACTGCTCTCTACACATAGACAGACTCCACACACAGGACACTGGACATTATTACTGTCAACAGTTCATCAATGGACAGAAACAAGGAGGGGATTACCGTGTGTATCTGGCCCTTCTCATCATTGACGTCCCTCCAGAGACAGAGCTGAAGGCTGGCAGCACTGTGACTCTGCGCTGCCTCCTGCACACTGGACACGGCCCTGGAGTCTGCAGTCACCCCCCGTACACCAGTGCTGATGTGAGAGTGAGCTGGGTCTCTGAGACAGGCGCTGAGCTGCAGGGAGACACATACCAGATCTCCACTGATCACCCCTGTCTCTCCACACTGACTGTGAGGCTCCAGACCTCAGACCACAACACACAGTGGAGATGTGATCTGACAGAGGGGGGAGCAGTGAGGGtctcacagagacacaccatTAAACTCACAGGCTCACCCATAGAAACCATTGTGTCCCTCTCCATCATCCTCCCTGTGGCCCTGCTGATAGCTGCAGTGGCAGTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006286 True 756 mRNA 0.54 3 1573128 1574818

Neighbor

gene id symbol gene type direction distance location
AMCG00006287 NA coding upstream 27278 1536907 ~ 1545850 (+)
AMCG00006281 NA coding upstream 139262 1424407 ~ 1433866 (+)
AMCG00006282 NA coding upstream 157965 1360610 ~ 1415163 (+)
AMCG00006269 NA coding upstream 301120 1265532 ~ 1272008 (+)
AMCG00006270 NA coding upstream 360034 1199821 ~ 1213094 (+)
AMCG00006288 NA coding downstream 63241 1638059 ~ 1647130 (+)
AMCG00006289 csnk2b,LOC101472534,LOC106588218,LOC101175345,LOC107677476,LOC106517726 coding downstream 85820 1660638 ~ 1661843 (+)
AMCG00006293 NA coding downstream 140665 1715483 ~ 1721110 (+)
AMCG00006295 NA coding downstream 154991 1729809 ~ 1734311 (+)
AMCG00006296 NA coding downstream 168224 1743042 ~ 1752407 (+)
G108587 NA non-coding upstream 18463 1352818 ~ 1554665 (+)
G108605 NA non-coding upstream 77420 1494364 ~ 1495708 (+)
G108602 NA non-coding upstream 85258 1487312 ~ 1487870 (+)
G108595 NA non-coding upstream 98161 1473372 ~ 1474967 (+)
G108584 NA non-coding upstream 175701 1350051 ~ 1397427 (+)
G108632 NA non-coding downstream 76237 1651055 ~ 1651459 (+)
G108831 NA non-coding downstream 314709 1889527 ~ 1890035 (+)
G108832 NA non-coding downstream 316218 1891036 ~ 1892425 (+)
G108833 NA non-coding downstream 318045 1892863 ~ 1893487 (+)
G108847 NA non-coding downstream 377396 1952214 ~ 1953042 (+)
G108585 NA other upstream 143141 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 257570 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 287076 1278460 ~ 1286052 (+)
AMCG00006256 NA other upstream 569257 985873 ~ 1003871 (+)
AMCG00006246 slc39a7,LOC107395789,LOC106588393 other upstream 717408 846561 ~ 855720 (+)
G108626 rps5,LOC107086176 other downstream 62579 1637397 ~ 1814610 (+)
AMCG00006294 NA other downstream 161114 1735932 ~ 1741336 (+)
AMCG00006366 NA other downstream 1668119 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1699964 3274782 ~ 3286179 (+)
G109309 NA other downstream 1786536 3361354 ~ 3365565 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location