Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006287 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 1536907 ~ 1545850 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0065007 | biological regulation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006287 | True | 1194 | mRNA | 0.54 | 6 | 1536907 | 1545850 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006281 | NA | coding | upstream | 103041 | 1424407 ~ 1433866 (+) |
| AMCG00006282 | NA | coding | upstream | 121744 | 1360610 ~ 1415163 (+) |
| AMCG00006269 | NA | coding | upstream | 264899 | 1265532 ~ 1272008 (+) |
| AMCG00006270 | NA | coding | upstream | 323813 | 1199821 ~ 1213094 (+) |
| AMCG00006263 | NA | coding | upstream | 388994 | 1143777 ~ 1147913 (+) |
| AMCG00006286 | NA | coding | downstream | 27278 | 1573128 ~ 1574818 (+) |
| AMCG00006288 | NA | coding | downstream | 92209 | 1638059 ~ 1647130 (+) |
| AMCG00006289 | csnk2b,LOC101472534,LOC106588218,LOC101175345,LOC107677476,LOC106517726 | coding | downstream | 114788 | 1660638 ~ 1661843 (+) |
| AMCG00006293 | NA | coding | downstream | 169633 | 1715483 ~ 1721110 (+) |
| AMCG00006295 | NA | coding | downstream | 183959 | 1729809 ~ 1734311 (+) |
| G108605 | NA | non-coding | upstream | 41199 | 1494364 ~ 1495708 (+) |
| G108602 | NA | non-coding | upstream | 49037 | 1487312 ~ 1487870 (+) |
| G108595 | NA | non-coding | upstream | 61940 | 1473372 ~ 1474967 (+) |
| G108584 | NA | non-coding | upstream | 139480 | 1350051 ~ 1397427 (+) |
| G108580 | NA | non-coding | upstream | 193152 | 1343552 ~ 1343755 (+) |
| G108632 | NA | non-coding | downstream | 105205 | 1651055 ~ 1651459 (+) |
| G108831 | NA | non-coding | downstream | 343677 | 1889527 ~ 1890035 (+) |
| G108832 | NA | non-coding | downstream | 345186 | 1891036 ~ 1892425 (+) |
| G108833 | NA | non-coding | downstream | 347013 | 1892863 ~ 1893487 (+) |
| G108847 | NA | non-coding | downstream | 406364 | 1952214 ~ 1953042 (+) |
| G108585 | NA | other | upstream | 106920 | 1350383 ~ 1429987 (+) |
| AMCG00006275 | NA | other | upstream | 221349 | 1286829 ~ 1315558 (+) |
| AMCG00006276 | NA | other | upstream | 250855 | 1278460 ~ 1286052 (+) |
| AMCG00006256 | NA | other | upstream | 533036 | 985873 ~ 1003871 (+) |
| AMCG00006246 | slc39a7,LOC107395789,LOC106588393 | other | upstream | 681187 | 846561 ~ 855720 (+) |
| G108626 | rps5,LOC107086176 | other | downstream | 91547 | 1637397 ~ 1814610 (+) |
| AMCG00006294 | NA | other | downstream | 190082 | 1735932 ~ 1741336 (+) |
| AMCG00006366 | NA | other | downstream | 1697087 | 3242937 ~ 3252080 (+) |
| AMCG00006368 | NA | other | downstream | 1728932 | 3274782 ~ 3286179 (+) |
| G109309 | NA | other | downstream | 1815504 | 3361354 ~ 3365565 (+) |
