AMCG00006296


Basic Information

Item Value
gene id AMCG00006296
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1743042 ~ 1752407 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006296
ttttgttttgctttgcttgtctTACCCCCTTTTGTTTTGTCCCCTGTGAACCCCAATAAACCCCGGACACTACCGGAACCTGGGACTCTCTCCCTTTTTGTGTCCAGCTTTTACAGGCGTCATACATACAGTCAGTCCTACCCTTACAGGAAGATGCATACATTTTCCTTATAGGGCAGCGTGGTGGGGTGGCCAGGAATGGAGGCTCAGAGAGACCACATGTAACgcaaacaacttttatttaataaatacacaattaaatggGCACGAGGACCAACCAAAAACATatacaacacacaacaaaacagaagacacacaGGCTGGACCATGTCTTCACTGTGTTTGTTCACTTGTCCATGGGACCGGATATGACGCTCATGGGAGGTTGCGCTTGGACGCAAACGCGCACCAGTACATCGTTCACTGTGGCCGCAAATCCGCGCAGCGCGACGTCACCCTCAGCTCGCTCTTCCTACAATGGACTGTATTGCTCGTCTTTGGTGTGGACGATGGCTGAGCTTTACTGTCTTTCTGCTCTTGCCAATGAGCCTGCAGGTGTCCTCCACTCCTGTACCAGTGTCCATGACAGTGGGGGACCCTGTCACTCTGCCCTGTGAGATACCTGCTTCTACTGCTGCTGGAATTGCCGTAAACAACCTTCACATCCAATGGAAAAATTCTAGAGGATCAGTACTGGAATCTGTGTCGGGAAGACTGCACATCGGCCACGAATTTCAAGGCAGAGTTGAATTGTCTGGAAATATTAGCCAAGGAAACTTCTCCCTCACTATTAATAATACCTGGATTTCTGATGAACTCCTCTATGAGTGCTTTTATGGAGTAAACACCCCAAAAATGAAGTTTGTAACAGATGTTTTCCTCATTATCAAAGTTCGCAATGAGACCCATGGTGTGCAGTGGGGTCAGGACCTCTCTCTCGTGCTGTACACCGGAGAACCAGTGGAGGTGCTCTTTAATGGCACTGTGCTTTACTCAGGGAGCAAAGGTGCGAGTGTGGGGAAGGTCACAGCTCCAGATGAGAAAGAGCCCGGCCCCAGGGACGAGCCGAGAGTGTCAGTGCGGGGTGAGACTCTGATTGTTAGCAGAGTGACAGCAGCTGACCAGGGCCAGTACACAGTGAGGGACAACGGGACCAAACGAATCATCAGCAccatctctgtgtctgtctctgagGAAGCTGTGACTGTGCTGATCATGTGTCTGAAGGAGAAGACACTTTTAAAGAAACTGTGCTTGAGATGCTATCCTGGCTATGAGAAGACAGCAACGCATGACATGGAGGCCAACAGCCTGGACTCGGTAAAGAAACACTCCCGTTCCTGTGGACAGCAACCTGCCCCCGGCCCCCCCACACAGCCTGCCTCCAGTTCTTCTGTC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006296 True 1398 mRNA 0.50 5 1743042 1752407

Neighbor

gene id symbol gene type direction distance location
AMCG00006295 NA coding upstream 8731 1729809 ~ 1734311 (+)
AMCG00006293 NA coding upstream 21932 1715483 ~ 1721110 (+)
AMCG00006289 csnk2b,LOC101472534,LOC106588218,LOC101175345,LOC107677476,LOC106517726 coding upstream 81199 1660638 ~ 1661843 (+)
AMCG00006288 NA coding upstream 95912 1638059 ~ 1647130 (+)
AMCG00006286 NA coding upstream 168224 1573128 ~ 1574818 (+)
AMCG00006297 NA coding downstream 362 1752769 ~ 1753029 (+)
AMCG00006302 NA coding downstream 11967 1764374 ~ 1793915 (+)
AMCG00006300 NA coding downstream 52894 1805301 ~ 1806040 (+)
AMCG00006306 NA coding downstream 108572 1860979 ~ 1865306 (+)
AMCG00006301 NA coding downstream 125150 1877557 ~ 1880080 (+)
G108632 NA non-coding upstream 91583 1651055 ~ 1651459 (+)
G108587 NA non-coding upstream 188377 1352818 ~ 1554665 (+)
G108831 NA non-coding downstream 137120 1889527 ~ 1890035 (+)
G108832 NA non-coding downstream 138629 1891036 ~ 1892425 (+)
G108833 NA non-coding downstream 140456 1892863 ~ 1893487 (+)
G108847 NA non-coding downstream 199807 1952214 ~ 1953042 (+)
G108854 NA non-coding downstream 239208 1991615 ~ 2011808 (+)
AMCG00006294 NA other upstream 1706 1735932 ~ 1741336 (+)
G108585 NA other upstream 313055 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 427484 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 456990 1278460 ~ 1286052 (+)
AMCG00006256 NA other upstream 739171 985873 ~ 1003871 (+)
AMCG00006366 NA other downstream 1490530 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1522375 3274782 ~ 3286179 (+)
G109309 NA other downstream 1608947 3361354 ~ 3365565 (+)
G109362 NA other downstream 1750774 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1817632 3570039 ~ 3621796 (+)

Expression


Co-expression Network