AMCG00006301


Basic Information

Item Value
gene id AMCG00006301
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1877557 ~ 1880080 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006301
ATGCCGTGTGTGTCTGAAGCCTGTGTGCTGCTGCTCAAAGGAGGCAAGTGGAGGAACGTGCAGTGCAGGAATGAGAGCGCCTTCATCTGCTGCGATGGTAGGCAGAGAAACCAAGACCTGGCCAGCGTCCAGGACCAGCCCTTCAACAGTAACCTGACAAATCTTTCCAACGAGACGTTCATTTGGATCGGGCTGCACCACGGCGTGGAAGAGGGCTGGCAGTGGTCGGATGGACAGGCTGTTGTCTACAACAACTGGACCCGGCTGCGAGACTCCTGGCAGAAGCTCTGCGTCATCATGGACGTGGAGGGGATGTGGAAGAACAGCTCCTGTGACTCTGAGAAACACTTTGTTTGTAAAGaaagcaGCCTTGGGACATACACTCTGAGTTCTGTGCCCATGAACCGGTCAGCAGCCAGGACCCACTGTGAGCAGCACCACGGACACCTGGCCAGCATCAGGAGCCCCTCTGAGAATGAAGCTGTGAGGCAGGCAGCCAGGGGCAGGGAGGTGTGGATCGGCCTGCTCAGGGGCCCCTGGCAGTGGTCCGATGGGGGGAACTCATCCTACAGGAACTGGGGCGACGGGGAGCCCAACAACAAGGATGGCAGGCAGGGCTGCGTGCATTTAGACAGGAGGGGTGCCTGGAATGACCGCCAGTGCTACGAAAGCTTCGCTTTCTTCTGCTACGAAGatGTGCGTGGGCTGTCCCTGGTGAGTGACAGGCGTCTGTCCTGGGCGGATGCTCTGTCTCACTGCCGCTCCTCTCTGCGGGGGGACCTGGCCTCAGTGCTCTCCTCCACCCAGCTCCTCTACTCCGTCTCAGTGGCCCAGAGCGCTGCCTCCCCCTGGCTGTGGCTGGGTCTGCGTCAGAGCCGGCTCTTCGGATTCTGGTTCTGGGTGAGTGGGGAGCCCCTGAGCTTCCAGCAGTGGGAGGGGGGGCAGGAGAGTGGCTGGGATCTacccccagacccccccagCCCCTGCGCTGCCAtgaacagagagacagggagttGGACTGCCAGAGACTGCGAGGAGGACCTCAACTTCCTCTgtcagactgactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006301 True 1068 mRNA 0.61 4 1877557 1880080

Neighbor

gene id symbol gene type direction distance location
AMCG00006306 NA coding upstream 12251 1860979 ~ 1865306 (+)
AMCG00006300 NA coding upstream 71517 1805301 ~ 1806040 (+)
AMCG00006302 NA coding upstream 83642 1764374 ~ 1793915 (+)
AMCG00006297 NA coding upstream 124528 1752769 ~ 1753029 (+)
AMCG00006296 NA coding upstream 125150 1743042 ~ 1752407 (+)
AMCG00006303 NA coding downstream 3674 1883754 ~ 1887570 (+)
AMCG00006308 NA coding downstream 16425 1896505 ~ 1908086 (+)
AMCG00006309 NA coding downstream 161936 2042016 ~ 2045884 (+)
AMCG00006311 NA coding downstream 180119 2060199 ~ 2068535 (+)
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding downstream 188670 2068750 ~ 2073323 (+)
G108632 NA non-coding upstream 226098 1651055 ~ 1651459 (+)
G108587 NA non-coding upstream 322892 1352818 ~ 1554665 (+)
G108831 NA non-coding downstream 9447 1889527 ~ 1890035 (+)
G108832 NA non-coding downstream 10956 1891036 ~ 1892425 (+)
G108833 NA non-coding downstream 12783 1892863 ~ 1893487 (+)
G108847 NA non-coding downstream 72134 1952214 ~ 1953042 (+)
G108854 NA non-coding downstream 111535 1991615 ~ 2011808 (+)
G108626 rps5,LOC107086176 other upstream 62947 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 136221 1735932 ~ 1741336 (+)
G108585 NA other upstream 447570 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 561999 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 591505 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1362857 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1394702 3274782 ~ 3286179 (+)
G109309 NA other downstream 1481274 3361354 ~ 3365565 (+)
G109362 NA other downstream 1623101 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1689959 3570039 ~ 3621796 (+)

Expression


Co-expression Network