AMCG00006303


Basic Information

Item Value
gene id AMCG00006303
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1883754 ~ 1887570 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006303
ACAGCCGCGCCGGAGCGTCATCGATTATTTCATTACAGCCATTACTATCGGAACAGcgctatatttatatttattgggTTGTATTGCTATCTTTGTATCTACGCGTTGcctattttgttttggaaataaacTCAAATTTGACAGCCGACGCCGGAGCGATTCTAATCCGATTCAGTCGACACTTGAACCGCCGGTAAAGACCATCTCTGCGCGGACACACGGACCCCAGCGGAGCGGCGCAGGGATACGAGCGGCACACGGACGACAGAGCAGCACAGCTGTGTGTTGTTCCCGAGATGGTGGCACTCATGTCCGGCTTGACCCCTCTGGACGGCGCGGCGGACACCGGGCTGCTGTGCTCGTCCTGCGGCTTCCTGCTGGTGCGGCCCCGCCAGACCGCCTGCGGCCACCGCTACTGCGAGGCGTGCCTGGGGAGGATGCTGGGGAAGTCTGAGAGTGGAGTGTGCTGCGTGTGCCAGGACCCTATACTGTCCACTCAgGTGTTTGTGGACCGGGCGGCAGAAAGCGACGCAGGCAGTGTGAAGATCAGCTGTCCATTCTCACACTATGGCTGCGCCTGGACTGGAGCACTGAGCGAGTACCTGtcCAGTCACCAGGGTCAGTGTGACTGCACAGATGAGCCCTGTGCCAACGCCAACCTGGGCTGCCGCTTTGTTGGCGATCGGTTGGCACTGTGTCAGCACGAGAGCGAGGCGTGTGAGTGGAGGATGGTGTCCTGCCCACACTGCCAGCAGGAACTGGCCTGGGCTCTGATACAGGATCACCAGTCCAGCTGTCCTCAGCTCCTCAATCACAATCATACCAGCCCTGCGGTCATCCAGCCCCGGGGGACGGGCCAGGGACAGACTCGGCAGCACCGCAGCCAGGAGGTCAACTCCGCCTTCAAGCAGCTGGCCATGGACCGCCTGCTGTCCCTGGCCTCCAAAGTGCTGCCCCAGCTCCCCCAGAAAGCCCCGCCCAGCCCTGCCCCTGCCCAACCCCAGTGCCAGTCGGGCACCTGCGAGGATGCCTCCAATGTGCGCCAGCTCCTCGGGGTCCTGAGCCAGGACCTGGAGGCGTGCCACCGGGCCATCGAGGGGCTGCAGTCCCGCTGTGAGCGCTACGAGCGCGTCCTGTCCCAGCTGAGCCCCCCACCGGCCCCTGCAGGGACAGGCGCCCCCTGCTCGccccgctcctcctcctctgtgaatCTCTCTCAGGACAAACCCCCCCAGCCCCTGATGTCCCCCCAGATTGCGGCCCGTAGCGGAATGGGAGCCCCCCCTGGCTGTCCCCCTGCCCACCTGAACCTCTCCCCGCCTCCTCCCCGGGCTGCCCCTCAGCTCTCCACCCACAACTGCCTCCCCCAGCCCCTGGTTTGCCCCCGAGCCATGTCTCCCCCTCTGTCCCCGTCCTCCCAGTCTGCCGCCTCTACGCCACCTGCGCTGCCACTGGCCTCCCAGAACGGAGTGCTGCTCTGGAAGGTTGAGAACTTTTCCGCCCATTTCAAAGCTGCAGCTCCTGTCTCCTCTccctactcctcctcctcttcctcctcctcctcctcctcctccagaccCAAGCCCTACGCCCTCACCTCACCCCCCTTCCAGACCAGTCCGCTGGGGTACCGCCTGTGCTGCCGGCTGTACCCCCAGGGTGACGGGGCGGGCCGCGGCACCCACCTGTCCCTCTTCCTGTGCCTGCTAAAGGGCGAGTGTGACCAGCTGCTGCCCTGGCCCTTCGCCCACAAGGTCAGCTTCACGCTGCTAGACTGCACTGCTGCCCGCCGTCACCGGGGGGAGACGTTCCTGCCCGACCCGCTCTCTGCCTCCTTCCACCAGCCCAGGGGCGCCATGAACCTGGCCAGTGGCTGCCCGCGCTTCGCCAGCCTGTCCCTGCTGGGGCTGGGGAgcggggctggggctggggggcAGGGCAGGTCTGCCTACCTGCACAACGACACCCTGTACATCAGAGTGCAGGTGGAGCCGGCTGGGGCTGgcctgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006303 True 2012 mRNA 0.65 6 1883754 1887570

Neighbor

gene id symbol gene type direction distance location
AMCG00006301 NA coding upstream 3674 1877557 ~ 1880080 (+)
AMCG00006306 NA coding upstream 18448 1860979 ~ 1865306 (+)
AMCG00006300 NA coding upstream 77714 1805301 ~ 1806040 (+)
AMCG00006302 NA coding upstream 89839 1764374 ~ 1793915 (+)
AMCG00006297 NA coding upstream 130725 1752769 ~ 1753029 (+)
AMCG00006308 NA coding downstream 8935 1896505 ~ 1908086 (+)
AMCG00006309 NA coding downstream 154446 2042016 ~ 2045884 (+)
AMCG00006311 NA coding downstream 172629 2060199 ~ 2068535 (+)
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding downstream 181180 2068750 ~ 2073323 (+)
AMCG00006310 NA coding downstream 192962 2080532 ~ 2089002 (+)
G108632 NA non-coding upstream 232295 1651055 ~ 1651459 (+)
G108587 NA non-coding upstream 329089 1352818 ~ 1554665 (+)
G108831 NA non-coding downstream 1957 1889527 ~ 1890035 (+)
G108832 NA non-coding downstream 3466 1891036 ~ 1892425 (+)
G108833 NA non-coding downstream 5293 1892863 ~ 1893487 (+)
G108847 NA non-coding downstream 64644 1952214 ~ 1953042 (+)
G108854 NA non-coding downstream 104045 1991615 ~ 2011808 (+)
G108626 rps5,LOC107086176 other upstream 69144 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 142418 1735932 ~ 1741336 (+)
G108585 NA other upstream 453767 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 568196 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 597702 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1355367 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1387212 3274782 ~ 3286179 (+)
G109309 NA other downstream 1473784 3361354 ~ 3365565 (+)
G109362 NA other downstream 1615611 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1682469 3570039 ~ 3621796 (+)

Expression


Co-expression Network