AMCG00006305


Basic Information

Item Value
gene id AMCG00006305
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1866559 ~ 1870731 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006305
ATGCCGGTGCAGTCTATCCCGCTGGCCACGGTGACCATCGGGCCGCAGTCATGGCAGGAGGACACGCTGCGCTCCATCCGCCTGGCCGGGCACCTGGTGCGCCGCGCCGCGGGCAGGGGGCCCCTGTCGGCCGGGGCCAGCGGACCGCGCTGCGCCTCTTCTCCTCTCCGGACCGGCAGGTCTGGAAACACTGAGGCCGACAGGCAGGTGTGGGAAGATAGTGATGGGATTGTACGTGAGCAGGAGGGGAATCCAGTGTCCACAGTGGACATGTGCTCCCCGCTGCCCCGCTCTGCCCTGCCGCCTCCCTACCTGCGGGAGCTGTGTGCGGGTCGGAGTGAGGCGGTGGTCCGGGGGTACCTGCGGGGGGTGCGGGGGGTGCGAGCGGCGCTGCAGCAGCTGGGGGCCAGGGTGGCCCGGGAGGTGAGCAGTCTGGGTCGCCGCCGGGGGGCTCTGGACGCGGCGCTGGCCTCGCTGCGGGGGGACCTGCTGCTCAACCACAGCTGTGTCGAGAGACGCAGCCTGAGGCCCCCCACCGCCGAGACTTGTAAAGAGGTCATGGAGATCTCCCAGGCAGCCCTCAGCCAGTCACAGCAGCTGAGGAAGAGGATCACAGAGCTGATTGGCCAGGCCGTCTCCCGGCAACAGGCTGCCCACCAATCAGTGAACAACGGCCTGGGCCCATTGTCCAGAGCTGACCTTCTGACCCGGGAGCGGCTGGACAGGCCGATGGTGCAGCTCTACCACAGACACCCCGGCACACAGCTGCCCGAGGCCACACAACTCATACAGGGAGGCGCTGTGCTCCGgagctctctcctctcctccggTCGTGACCTGGCGCTGCTGCGTCTGGCCCGCCTGCGACTGGACGACGACCTGCGCGGGAAGAGAGCGGCGGCCAGCGTGGACTCCTCCGTCGCCAGGCTGCGCCGGAGCCACGAAGACTGCCGCCGGGGAACCCCTCTGCTGCTGCAGCAGGGTGCCTGCTAgctgggacagacagacagacagatcttCTTCTTTTTAGTTCATTCTAActttcttgtttgctttgtgtgtgtgtgtgggggggggtgcaaaCTTTGGACTGCAACTCTACAAAAATCGGTGCTCGATCAGCTGTAATCCTCAGATTTCTCTCCAGGGCTGAATCAGCAGACTCTGGGAAGACATGGATGAGTTCCTGTGTTGATCAGCTGTTATTAAAGACAATGAATCGCCCTCTGACACTGTTTCTAATCTAGTGTGACGATGCTCTCGACTCCTCCTGTACTAACTCACAGTTCTGGACCGATTACAATGGAGTTCTCCAGTTTGAGCAATGACAGCGCCTGGCTTTTACAGATTTTAAGAGTGCGGTTCGACTACCGATCTGCTCCTTTATACTGCGTTTACACTGCAGGCTCAAGCCTAAGCAGCTTTGGTCCGACTGCCAGCAAGATTCGTTTCACATGTAATAGATTTGACGTTCTGCTTGTTGGAGTTACTGAAAATGACGCTCAAGTGAAAGGGGCGTCGCTTGGAGACGCTCAATTTGTGCGTAAGGCCGATTGTGTTTACGCTGCAGTTGGGACAGACCTGAGCCGTCTCGGGGCCACCTCTTAAGCAGGCCGCTTTTAGGTCGGCTTTGGTCCGCCTGTAGTGTTTACACTGCCCTATCAGAACAGAGCCCTCATAGAAGGGGCCCGTGTGAACGCAGTATTCGAGTAGAACGCAGTagatacagtgtgtgtgtgttactgtgtgtgaaGAGTGTCTAATGGCGACAGTAACCAGTATCTGATCCAATAAACTGTATTGATGTGATGGTGTGGTTGTGCTGTCTGTGTAGACCAGAGGTGTCAAGGCAGGAGATTCAATCCAGAGGTTTAATTCATAAACAAGGAACACAGAGACATCTAC

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG:

id description
ko03030 DNA replication
ko03430 Mismatch repair

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006305 True 1905 mRNA 0.59 5 1866559 1870731

Neighbor

gene id symbol gene type direction distance location
AMCG00006304 rps5,LOC106570065 coding downstream 48191 1808656 ~ 1818368 (-)
AMCG00006299 NA coding downstream 157054 1693243 ~ 1709505 (-)
AMCG00006290 NA coding downstream 183203 1678262 ~ 1683356 (-)
AMCG00006291 NA coding downstream 267102 1595672 ~ 1599457 (-)
AMCG00006283 NA coding downstream 311005 1550443 ~ 1555554 (-)
AMCG00006307 NA coding upstream 59903 1930634 ~ 1932402 (-)
AMCG00006314 NA coding upstream 120571 1991302 ~ 1999290 (-)
AMCG00006315 NA coding upstream 140631 2011362 ~ 2016934 (-)
AMCG00006316 NA coding upstream 156405 2027136 ~ 2034235 (-)
AMCG00006320 NA coding upstream 226842 2097573 ~ 2099149 (-)
G108805 NA non-coding downstream 82993 1734195 ~ 1783566 (-)
G108789 NA non-coding downstream 145428 1719629 ~ 1721131 (-)
G108791 NA non-coding downstream 195928 1664948 ~ 1670631 (-)
G108790 NA non-coding downstream 203526 1661753 ~ 1663033 (-)
G108772 NA non-coding downstream 324198 1536944 ~ 1542361 (-)
G108834 NA non-coding upstream 15234 1885965 ~ 1886276 (-)
G108948 NA non-coding upstream 182260 2052991 ~ 2057622 (-)
G109090 NA non-coding upstream 475791 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding upstream 480023 2350754 ~ 2356238 (-)
G109099 NA non-coding upstream 524018 2394749 ~ 2397990 (-)
AMCG00006298 NA other downstream 141711 1722561 ~ 1724848 (-)
G108784 NA other downstream 206555 1646480 ~ 1660004 (-)
G108755 NA other downstream 311895 1350485 ~ 1554664 (-)
G108829 NA other upstream 10551 1881282 ~ 1881837 (-)
AMCG00006313 NA other upstream 149270 2020001 ~ 2024143 (-)
G108938 NA other upstream 227087 2097818 ~ 2130255 (-)
AMCG00006328 NA other upstream 453400 2324131 ~ 2329991 (-)
AMCG00006344 NA other upstream 710606 2581337 ~ 2586846 (-)

Expression


Co-expression Network