AMCG00006307


Basic Information

Item Value
gene id AMCG00006307
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1930634 ~ 1932402 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006307
ATGGAGAGAGTGATTGCTCTGCACCGCCCATCatctctgtgcatctctgtgctCCTGGGTGTCTTGGGCTTCAAAGTTGTCTCCTCCACTACTGTGTCCGTGTCAGTGGGGGACTCTGTCACTCTGCCCTGTGATGGAGCTGCAGCTGCTGGGATATCTGAGGAGAAACTCTACATCCAGTGGAAAAGTACAGAAAGAGATGTGTGGCAGTCAATCTACGGATCTATCTCCCTCGGCCGACACTTCGAGGGCAGAGCTGAGGTCCCCAGAGAGAGGATCAGACAGAGGGACTTCTCTCTGACCATTAACAGCACCCTGCTCTCTGACGAAGGCCTGTACGAGTGCTATTACAAGAATGGAGGAATATATATGAAGTTTCTTGGAAGTGTTCAACTCACTGTGACAAGTGTTAGCAAAGCCCTCTCTCTGCAGTCTGGAGccgccctctccctccccctgttCACTGCAGAGCCAGTGGaggtgctgtttgctgctgcaggagagggagcctctgtctcagtgtgcgCTGTGGAGAGGGGCGCAGCGAGCTGCCCTGGCCCCGGGTACGAGCACAGAGTGTCAGTGCAGAGCGGCTCTCTGACCCTGCGCTCACTCACAGCAGCTGACCAGGGAAACTACACAGTGAGGGACTCCAGGACCAACCGCACCATCAGCagcgtctctgtgtctgtgtctgaggAAGACCCCAGTCCCTCTGCATCGTCTCCTCCAGCTTCAGCTGTGACTGTGACCGCGACTGTGGCTGCTGTCTGCGTCTCTCTGGCAGCTGTGACTGCACTGATCATGTGGCTGAAGAGGAAGACTCTTTTGCAGACACTGTGCTTAAAACACTATCCTGGTTATGAGAAGACTGCAGCGCAAATTATTGAGGCAAACTGCTTGGAATTGGGAAAGAAAAGCTCCCATTCCTGGAAGCAACCGCTAGAGCAGTAG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006307 True 954 mRNA 0.55 4 1930634 1932402

Neighbor

gene id symbol gene type direction distance location
AMCG00006305 NA coding downstream 59903 1866559 ~ 1870731 (-)
AMCG00006304 rps5,LOC106570065 coding downstream 112266 1808656 ~ 1818368 (-)
AMCG00006299 NA coding downstream 221129 1693243 ~ 1709505 (-)
AMCG00006290 NA coding downstream 247278 1678262 ~ 1683356 (-)
AMCG00006291 NA coding downstream 331177 1595672 ~ 1599457 (-)
AMCG00006314 NA coding upstream 58900 1991302 ~ 1999290 (-)
AMCG00006315 NA coding upstream 78960 2011362 ~ 2016934 (-)
AMCG00006316 NA coding upstream 94734 2027136 ~ 2034235 (-)
AMCG00006320 NA coding upstream 165171 2097573 ~ 2099149 (-)
AMCG00006322 NA coding upstream 166765 2099167 ~ 2102889 (-)
G108834 NA non-coding downstream 44358 1885965 ~ 1886276 (-)
G108805 NA non-coding downstream 147068 1734195 ~ 1783566 (-)
G108789 NA non-coding downstream 209503 1719629 ~ 1721131 (-)
G108791 NA non-coding downstream 260003 1664948 ~ 1670631 (-)
G108790 NA non-coding downstream 267601 1661753 ~ 1663033 (-)
G108948 NA non-coding upstream 120589 2052991 ~ 2057622 (-)
G109090 NA non-coding upstream 414120 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding upstream 418352 2350754 ~ 2356238 (-)
G109099 NA non-coding upstream 462347 2394749 ~ 2397990 (-)
G109163 NA non-coding upstream 886067 2818469 ~ 2832329 (-)
G108829 NA other downstream 48797 1881282 ~ 1881837 (-)
AMCG00006298 NA other downstream 205786 1722561 ~ 1724848 (-)
G108784 NA other downstream 270630 1646480 ~ 1660004 (-)
G108755 NA other downstream 375970 1350485 ~ 1554664 (-)
AMCG00006313 NA other upstream 87599 2020001 ~ 2024143 (-)
G108938 NA other upstream 165416 2097818 ~ 2130255 (-)
AMCG00006328 NA other upstream 391729 2324131 ~ 2329991 (-)
AMCG00006344 NA other upstream 648935 2581337 ~ 2586846 (-)
AMCG00006354 NA other upstream 956084 2888486 ~ 2894534 (-)

Expression


Co-expression Network