AMCG00006308


Basic Information

Item Value
gene id AMCG00006308
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 1896505 ~ 1908086 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006308
ATGGCGGCTCCCATGAGGGTGGTCCTGCCTGGGGAGAGCATCACCCTGCCCTGCGACATCACACACGAATATGAAACCCTGTGGTTCGCACAGTGTGAGAAACAAGCCCCGTTTCTGTGCATCGCGACCAAGGCCACAGACTCTGATTTGACCACAGAGCTGAACTCGTCCTCTCACTCGTTCAGTCTGCGGATCGTGAGCGTCACGGAGGCGGACCTGGCGCTGTACTACTGTGCGGTGAGGGAGAGCGGAGTCCTCAGATTCAGCACAGGAATCCGGCTCGACTATCAGCAGGAAAATGACTCTCGGACCGATgggAAACACAACAGTGATCCCGATGACCTTCCCCCCACTCCCCTGCTCTCAATGTGCTGGGGGCTGCTGGGCTGTGTCCCTCCGCTGTGTGTCCTGCTGTCGTCTCTCTGTGTCTACTGCCTCTGCAGGACAGGTCAGTGCTCCCACCCTACTGCACCGTGCATGGAGGGagaaattgattga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006308 True 498 mRNA 0.58 3 1896505 1908086

Neighbor

gene id symbol gene type direction distance location
AMCG00006303 NA coding upstream 8935 1883754 ~ 1887570 (+)
AMCG00006301 NA coding upstream 16425 1877557 ~ 1880080 (+)
AMCG00006306 NA coding upstream 31199 1860979 ~ 1865306 (+)
AMCG00006300 NA coding upstream 90465 1805301 ~ 1806040 (+)
AMCG00006302 NA coding upstream 102590 1764374 ~ 1793915 (+)
AMCG00006309 NA coding downstream 133930 2042016 ~ 2045884 (+)
AMCG00006311 NA coding downstream 152113 2060199 ~ 2068535 (+)
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding downstream 160664 2068750 ~ 2073323 (+)
AMCG00006310 NA coding downstream 172446 2080532 ~ 2089002 (+)
AMCG00006317 NA coding downstream 226270 2134356 ~ 2137701 (+)
G108833 NA non-coding upstream 3018 1892863 ~ 1893487 (+)
G108832 NA non-coding upstream 4080 1891036 ~ 1892425 (+)
G108831 NA non-coding upstream 6470 1889527 ~ 1890035 (+)
G108632 NA non-coding upstream 245046 1651055 ~ 1651459 (+)
G108587 NA non-coding upstream 341840 1352818 ~ 1554665 (+)
G108847 NA non-coding downstream 44128 1952214 ~ 1953042 (+)
G108854 NA non-coding downstream 83529 1991615 ~ 2011808 (+)
G108856 NA non-coding downstream 100001 2008087 ~ 2033572 (+)
G108878 NA non-coding downstream 190263 2098349 ~ 2128000 (+)
G108884 NA non-coding downstream 220232 2128318 ~ 2130263 (+)
G108626 rps5,LOC107086176 other upstream 81895 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 155169 1735932 ~ 1741336 (+)
G108585 NA other upstream 466518 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 580947 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 610453 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1334851 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1366696 3274782 ~ 3286179 (+)
G109309 NA other downstream 1453268 3361354 ~ 3365565 (+)
G109362 NA other downstream 1595095 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1661953 3570039 ~ 3621796 (+)

Expression


Co-expression Network