AMCG00006310


Basic Information

Item Value
gene id AMCG00006310
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2080532 ~ 2089002 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006310
ATGCCGCCGGGGCCTAATGACATGTGCCGGGCGTGTGGCTCAGCCCTGAAGGGCACCCGCAGGCGCTGGATCTTCGGGGGCCAGAAGAAGGAGCCACACAGGGCCAACGTGACCCCCAATGGCGGCCTGTCGCGCTCCCGGGCCTCCAGCCGCTCCTGGGGCAGCTCCCCTTCCCTGtgctccccctccctctcctccgcctcctcctcctcctccgccgccGCCCCGTCCCCCCCCGGCCACAAGATGGACCTGCTGGCGGTGCTGACCCACGTGCTGGGCCGGGCCGTGCCGCGCGGGGACGGCCGAGGGGAGTTCCTGTGCGGGAAGTGCGTGTCGGCGCTGGAGCGCGTGTTCCGCTTCGACGCGGTGATCGCCCGGGTGCGCGCGCTCTCCTCCGACAAGCTGCGCCGCCTGGAGCAGGAGAGGGACGCGCTGGGGCGCTGGCTGGCCGGGGTCTATGCGCAGCGCCACCCCCAGGACCCGAGGGGCCACGCCGGGGGGTCCGGGGAGGAGGACGGGCAGGGGGAGGGAGCCAGCGGGGCCTACAGGCAGCTGCTGCGGGACAACATGGCGCTGTCGGAGTTCGAGTGCTGGTCAGAGAGGTGGAGCTCCTGCCGGGAGGCGCGGGGCTGCCGGGGCGGCTGCGGCGGGCGGAAAGGCTGCGAGGGCTGCGACTCCCTGCGCGTGACCGACTCAGCCTACGAGTCCGTGGTGGGCCTGCCCCGCCGGCTGCCCCGCCCAGCCGCGCCGCTGGCCCTCTCCCGAGACAAGTCCCGCAGCATGCCCCTGGACTGGCTGGGCCCCTCCGCCCGGCACGGCTCCggctcctcctgctcctcctcctccacgcTGGGCGGGGCCGGGCAGGGCTCCCTGGGCTCCTCCCTCCGCGGCTCCAGCCAGTCCCTGATCTCCGGCCCGGCCTCCCGCTCCGCCTCCCTCCTGTCGCTGGACTCGCTGGGCGGGCCGGACCCTTTCGACTGGCCGGAACCCGAGTCACTCGACCTGACGGACGTGCTGAGCCGCCTGAGGAGGGTCCGGTCCAGCCCGGTGCGGACCCCGGCCGGGAGCAGGATCCCTGTGAGAGTCGGTCCGTCccagagagggggtggggtggcagCGCTGGTGCGGGAGCTGGAGtttggagaggaggaggggaggagtaACGGCACggagggagaagagagggatGTGCTGACCGAGCTGGGAGACGAGTACCTGCCGCTGCACAGAGAGAGGAGCGCGGGGCGGCAGCACATGCACAACGCAGTGAGGCAGCTGAGAGGGCAGCTGGATCAGGCGCAGGCCCAGATCAGGACCCTGCAGGCCCAGCAGAGGGGCGTGGCCACACTGACAGAGGGCGTGGTCAAGCTGATGGTCAGGCTGGGACAGAGCCTGCGCTGCAAGGAGCAGGTCATCCAGaacGCTGTGGACAGTCAGCTCAGTGAGTTGAGGCAGCGGGATCAGGAGCTGGAGTCTCTGCGTCGAGCCAACCGGgagaaggacagagacctgAGCCGCCTCAACACAGTGCTGCACAGCAACCTGGACACCATCGcggagctGCGTGCCGAGCTGTCCCGGCTGACCCAGGCGCTGGAGGAGCGAGGGAGGgcggcggagagagagagggaggcctGGCGCCTCAGAGACAGCCTGCACCGCTCTCTGCTGAAGGACAGAGACGCCCTCGTCGGCAGCCTGCAGGGGGCGCTCAGCACCAGCCAGAAAGACGTGCAGGCGCTGTCCCAGTCAGTGATGGGTCTGGGCGTGGAGGGGAGCGGGGCGGAGGGCCAGCTGGCTGGGCGGCTGCAGGAGAAGGAGGCCCTGCTGGAGCGCCTGCTGAGGGAGCAGAAGGAGAAGAGCGAGGCCAGGTGGCAGGAGGTGGAACAGCTCTCCGCCGTGCTGGACGACACCATGGCCACTATACAGgtGCCGAGTGACGGTCAGGCGGTGTCCTCAGTCTGGGCTCAGCTGGGGGAGGCCCGCAGGcagctgagggagagggagagcgagggcagagagagggagagggagtggcgcagcgagagggaggagagagagcgagaggagcGAGTGTTGAGGGAGAGCCTGGAGAAACGAGACAAGCTCATACAGCAAGTCCTGAGTGACTCGGAGGAGAGGGAGCGGCTGCTGAGCGACCTGCAGCACAGCCTGCTGACCCTGCAGGAGCCCCGCACTGCCCTCAAACACACCCTGTGACCGAGACTGGGAGACAACACAACTGTACAACTGCcttacagagagacagagagactgggAGACAACACAACTGTATAACTGCCTTACAGACAGAGACATTGCCTAGCACTAGACTTACAATAGAGCATAATACTGGAATAGGTCCACTTCCTATAGACTCCCTCACTGCCGGGAGGGTGGATAACCAAtcccagacagagagacagtcagAGTCACGGCCACAGCTCTGCCAAAGACAAGGTCGGGGGGCGTTGGATCTGGATGAGCTAATATGAGATGCCTCCTGTATCTGCCAGTTTATACAGGGAGGCCCCCCTCCCCCGTCCCCTCTGTGAGTGAACTGGATGAATGTCAGAGAGAATCGGGGACTGGGGACGGGTGTGGTGACGGGGGGTGACGTTGCTGAAAGGTGTCAGTCAGTGATGTCAGTATTTATCTTGTCACTCACTGTCTCTGAGTCTCTACTGTAGCTGCCAAATACTGACTCTGGAAAACTCCCAGTCCACTGCACACTGATCCTGACtgtgggtgtgtgagagagctgCTGCCAAATACATCCCCTGGGGACGATTAATACtgcattcacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccctctctctgtctctcacacacacacacatttctctgtGCTGACCTCCTGCTCTTGGGGTCTCTGGGACACAGTTAGTTTCTAGTGTGATAGAGTAGTGACGATACGGGGGAGGGTCTTACAGGGGCGGTGTCTAGGGTCcagtgtactgtatttaaatgattgagCTGCATGGTAATTCTTGCACAAGGGGCGGTGGGGTGTGCCTGGGGTGTTACAGGGCTGAATatctcccacaatgcactcAATGCATAACCTTTATTTTAAAGCCATAATCTCtctttacaaaagaaaaataataatatataagcTAAGGTTATGATTGTGACTGCCAGGGGAAACGCATGTCCGAGTGAGGTATCTTTTCTGGGGGGTGGGGTTaagacttatttttatatactttgAATCTTTCCTGTTCCTGTTATTATAAAGCTGTACAGAATCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006310 True 3324 mRNA 0.63 8 2080532 2089002

Neighbor

gene id symbol gene type direction distance location
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding upstream 7209 2068750 ~ 2073323 (+)
AMCG00006311 NA coding upstream 11997 2060199 ~ 2068535 (+)
AMCG00006309 NA coding upstream 34648 2042016 ~ 2045884 (+)
AMCG00006308 NA coding upstream 172446 1896505 ~ 1908086 (+)
AMCG00006303 NA coding upstream 192962 1883754 ~ 1887570 (+)
AMCG00006317 NA coding downstream 45354 2134356 ~ 2137701 (+)
AMCG00006318 NA coding downstream 65395 2154397 ~ 2171374 (+)
AMCG00006324 NA coding downstream 102523 2191525 ~ 2192885 (+)
AMCG00006323 NA coding downstream 115895 2204897 ~ 2205971 (+)
AMCG00006327 NA coding downstream 277290 2366292 ~ 2371085 (+)
G108856 NA non-coding upstream 46960 2008087 ~ 2033572 (+)
G108854 NA non-coding upstream 68724 1991615 ~ 2011808 (+)
G108847 NA non-coding upstream 127490 1952214 ~ 1953042 (+)
G108833 NA non-coding upstream 187045 1892863 ~ 1893487 (+)
G108832 NA non-coding upstream 188107 1891036 ~ 1892425 (+)
G108878 NA non-coding downstream 9347 2098349 ~ 2128000 (+)
G108884 NA non-coding downstream 39316 2128318 ~ 2130263 (+)
G108890 NA non-coding downstream 70975 2159977 ~ 2252346 (+)
G108889 NA non-coding downstream 161565 2250567 ~ 2289455 (+)
G108914 NA non-coding downstream 170940 2259942 ~ 2262497 (+)
G108626 rps5,LOC107086176 other upstream 265922 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 339196 1735932 ~ 1741336 (+)
G108585 NA other upstream 650545 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 764974 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 794480 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1153935 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1185780 3274782 ~ 3286179 (+)
G109309 NA other downstream 1272352 3361354 ~ 3365565 (+)
G109362 NA other downstream 1414179 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1481037 3570039 ~ 3621796 (+)

Expression


Co-expression Network