AMCG00006311


Basic Information

Item Value
gene id AMCG00006311
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2060199 ~ 2068535 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006311
ATGCTGACGAACAAGCAATACTGCACCACCCCTGAATGCGCAGCACTGCGCCTGCGTGCGGCCACACCGGAAACACTTCCCCAGGGTGCGGCCGAGCGTCCTGCTACAAGCCTCAGTCTGCAGCGCAGAGGTCTCTCCTGCGGCGCCAGGGAGCTGCAGCAGACGAGCATCCCCGCCGGCGCTTTCTGGGGCGCCTCCGCTCGGAGTCCTCCGGTACCCGAACCTGGCCCTCTGCGCGGAGCTGGACACGGCGCCCCGCTCGCCCGATTGCACAAGTGCCCGCCCCGCCGCAGCTCCGGCACAGCGGATCTCCGGATCTCCACACACAGCACGATGCTCAGACTCGACCCGGCGTGGCTGCGCCGCGGAGGCCAGCTGTGGACGACGCTGTCCCGGTACCTGCGGGCGCTGGAGCCCCACCTGCCCCCCAGCGAGTGGCAGCAGGCGCGGGCGGAGCTGCAGGAGTTCAGCCGGCAGGGTGGGGCCGGAGAGGGGCTGCAGAGGAGCCTGGAGAGGAGAGCGCAGCGCATGCACAACTGGgtCTCGGAGTGGTGGCAGCAGTCAAACTATTTGGAGAGCCGACTGCCCCTGGCTGTTCACTCGAACCCGGCCGTCGCCCTGCCCCAGCAGGACTACAGCGACTGGAGGGGACAGCTACTgtTTGCAGCGAAGCTCATAGCAGGAGTCCTGGACTTCAAAGCCAAAATTGACAGtcACGCTCTGCTGGTGGAGTACATGCGTGGCCGGCCCCTGTGCATGGAGCAGTACAGCCAGGTGTTCTCGTCCTGCCGTGTCCCGGGGCCGAAGCACGACCACGTCCTCCTGTACAACCGCATCCGCCGGCCGCCCACCCACATCACCGTGGTCCGGAACTTCCAGttctTCCAGCTGGAGGTGTATAACAGCGACGGCTCCCCTCTGACGCGCGCTCTGTTCGGGGTGTGTCTGGACGCCCCGGTGATGCGCGTGTCCGAGGGGCGCTACTCCAGCCGCATGGCCGCCCAGGTGCTGCATGGGGGCGGGACCTACTCCAACAGCGGCAACCGCTGGTTCGACAAGACCCTGCAGttcatcGTGGGGGAGGACGGCTCGTGCGGGGTGCTGTATGAACAGGCCATAGCAGAGGGCCCCCCCATTGCTACCATCGTCGACCACGTACTGGAGTACACtaagCAGCCGGAGACCGTGCGCGCCCCCATGGTGCCCCTCCCCCACCCGAAGAAGCTGTACTTCTACATCGACCCCGAAATCAAGAGGGACATCGAGCTGGCCAAGCAGAACCTGGACAGCCTGATTAACGACCTGGACATCAGCTGTTTCACATTCCGGAAGTTTGGGAAGAACTTCCCCAAAAAGCACCGGCTCAGCCCCAACTCCCTGATTCAGACTGCCCTGCAGCTCGCCTACTACAGGATGTACGGGGAGCTGGCCGTAACGTGTGAGAGCGTGTCTCTGCGCATGTTCCGGGGCGGCCGCACTGACACGGTCCGCTGTGCCACCCCTGAGGCCCTGCGTTTCGCCCAGGCCGCTGACGACCCCTGCGTCATGAGGGAGATGAAGGTGGCTCTGCTGAAGGAGGCTGTAGAGGCTCACAGCATCCTGACTGAACAGGCACTCCAGGGTCAGGCCATTGATCGCCACCTGCTGGGCCTGAAGCTGCAGGCCATCGAGGACGGACGGACCGTCCCCACACTGTTCATGGACACAGCCTACGCCATCGCCACACACTGGAGACTCCGGACTGGACAGGTGGCCTCTCGCACGGACAGTGTCATGTGCTTTGGGCCACTGGAGCCCGATGGCTACGCTGTGTGCTATAACCCCATGTCTGAGCACATCAACTTCTCCGTCTCGGCCTTCAACTGCTGCGAGCAGACGCACGCGGAGAGGCTGGCCCAGGAGATCCGCAGAGCCCTCGGTCACctgcaggagctgctgcagcCCTCCCACACGGCCTgaggcagagagggggagggagagagggaagggcgGAAAGAGGAAAAAGGTGGACTGAGACGGTTGTAACTGCTGCCTGACTTTaacaacacagcactgcactgtacacagcagtcacagagacgcacacacactgcattctcacacaaacacacacacaccatgagACAGGCTGACggatacaaacatacacacagaccgactgacagacatacagactgacagacaggcagacaggcagacaaacACGCTTCGGATCTGAGTTTTGAGGATTCCATTGACTGGTAGAGAGACTCAGAATGCTTGCAGCTGATTGGTGGAGAGAGATTCTAATTGGAATACAAAACCGAAACCTCTCATCCTGGAtatatgcaaacaaaacaaaaccaagaaaaacGTGATTGGTTGGAAGGGACTGCAGGGCTTAGCACCCATTGGCTGGGACATTTGTGTCCTTAAATGCTATTGGCTGGATGATGTTCTTACCTCAAAGGCCATTGATTGGCTGTCCTTCAAAAGCATTAGCTATTATTccaaaaaagattaattattcTTCTGGTGATGAGTGATTGACTTGGAGAAAGTCTATTGGCTGGAAGAATACATTTCATAGGATGGGATTGAATGGGAGAAAAGGCCCTTGTTGGCTGAGACATGGACACGGGCTCAATTGGACAGGACCAAAGCAGCTGGAGAGAGGCCATTGTCAGGAACACTCCGGCTCTTCTGTGTGATTGGCTAAAAGATACCAATGGTGAGATGCAATTTGCCGGAACGATTGTTCTGGGGGAGCTGATTGACACTTGTCCCCAACAATAATTAAAGCATTGAGAATTTTGACCAAaatactaatgaaaataaactacattttggagttaattaaatatttctgtacTATCCTGGTGTTCTGTGTTGTCTTTGcagtagaaaaatacataattctgGTCGGGGAGAAACTTCAGAAGACGTCTCCTCCCCACCTCCTTATTCTTCTTCTGTATCCAGTAAGAGCTGAACATGTTTTAGCTGTGACTTCAGAGGTGACAAAATGCCCTACAATCCTAATTTCCCACCAGTTGTGTTGAGGAAGTATTCAGCTCACATACTGCGTGCAGGATATTATTTTGGCTTTACGTTCAGGTTAATAGACATTAATTGTTAATCTAGATTAGTGAGGGTATCTGTTGTTTTCAGTAGTTCCTTCCCTCCATTCTGTCTAGTAGTATTTGgtttagtttaatacatttacagctgTGTCCAAGTGAGCTTAAAGGTTAACCATCCTACAGTAAGAGCAATAAAACAATGCGTATGTGCACCTTGCCTGTCTCTGTACACTAGTACTCATGGGAGGAGGCGGATAGGGTCCCTATATGACCGTCATTAATTCCATAGCAGGGTGGAATGTAATTACATGCAACGGTACCATCTGATCTCTGCAACAGCGTTCCCTGTTCGTGCTCTGTGTTTTACCACTGTCTGGGAGGCCTGcattttatagttattttactGTAGCTGCTGAACAAAGATCACTTGCCACAAATGAAAACGGAGGAAGCGGATACTTTCGATATGCCGCAGCTATCACCTGCACTTCTCTAAGATTTACGAGCTGTTTTCGGGAGTGTTGGGGGGGAGTGAGTCTTGTATATTCCTTGTTCCACATCCTTAAAAAAGACTAACAATTTCTAAAATGTTACgttctttacaaaaataacatttaaattacatttgcattgcatAGACTTTGTTGATTTTGCTGGTCGACAGGTTCAAGAAGTCTAACGAATCGTGTTGCCACACGTGGGTGGGTTTGTGTTTGTAGGTAAGTTAAATGATCTCTAAGATTTTTAGATAGTTTGTTGGTAGGCAGAAGCAGAGATGTCTGTCCACCTCCTTTAAACATACTAAAAGAAATGGAGATGTTGTACTTGTGAAAGTAGACTTTGGCCAGCACAATTCAAGTTGTGTGGggtaaacaaatataat

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006311 True 3945 mRNA 0.53 16 2060199 2068535

Neighbor

gene id symbol gene type direction distance location
AMCG00006309 NA coding upstream 14315 2042016 ~ 2045884 (+)
AMCG00006308 NA coding upstream 152113 1896505 ~ 1908086 (+)
AMCG00006303 NA coding upstream 172629 1883754 ~ 1887570 (+)
AMCG00006301 NA coding upstream 180119 1877557 ~ 1880080 (+)
AMCG00006306 NA coding upstream 194893 1860979 ~ 1865306 (+)
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding downstream 215 2068750 ~ 2073323 (+)
AMCG00006310 NA coding downstream 11997 2080532 ~ 2089002 (+)
AMCG00006317 NA coding downstream 65821 2134356 ~ 2137701 (+)
AMCG00006318 NA coding downstream 85862 2154397 ~ 2171374 (+)
AMCG00006324 NA coding downstream 122990 2191525 ~ 2192885 (+)
G108856 NA non-coding upstream 26627 2008087 ~ 2033572 (+)
G108854 NA non-coding upstream 48391 1991615 ~ 2011808 (+)
G108847 NA non-coding upstream 107157 1952214 ~ 1953042 (+)
G108833 NA non-coding upstream 166712 1892863 ~ 1893487 (+)
G108832 NA non-coding upstream 167774 1891036 ~ 1892425 (+)
G108878 NA non-coding downstream 29814 2098349 ~ 2128000 (+)
G108884 NA non-coding downstream 59783 2128318 ~ 2130263 (+)
G108890 NA non-coding downstream 91442 2159977 ~ 2252346 (+)
G108889 NA non-coding downstream 182032 2250567 ~ 2289455 (+)
G108914 NA non-coding downstream 191407 2259942 ~ 2262497 (+)
G108626 rps5,LOC107086176 other upstream 245589 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 318863 1735932 ~ 1741336 (+)
G108585 NA other upstream 630212 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 744641 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 774147 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1174402 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1206247 3274782 ~ 3286179 (+)
G109309 NA other downstream 1292819 3361354 ~ 3365565 (+)
G109362 NA other downstream 1434646 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1501504 3570039 ~ 3621796 (+)

Expression


Co-expression Network