AMCG00006313


Basic Information

Item Value
gene id AMCG00006313
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2020001 ~ 2024143 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006313
ATGCCTACGGAGGCAGGGAATGGGGGGGACCTTGGTGATGGCAGCAGGAACCATGGCGATGGGGTCCATAGTGACAGCCAGAGACAAGAAcgacaacaacgacaacaacaacaacaacaacaacaacaacaacaacaacaacaggccCTCAAACAAGTCAGCACCACCGCAGACAAAACAGAGAGCAAGAAGACCAGAGAGAAGAAGTCTGAGAAGCGGAAGAGTTTGAAGGAGGTGGGATCGAGGAGGGAGAGGtcaagggagagggagggggggaaggagAAGCCGCAGGGGCcggggggggcagagagggaCGTGGAGAGGGGGCGGGCATCGACGGAGGCGGTGCTGGCCGAGGGAGAGTGCTGCGTGTGCTTCTGCCCCTACGACAACATGTTCAAGGCCCCCAAGCTGCTGAAGTGTGGCCACACCTTCTGCCTGGAGTGCCTGGCGCGCATCAACGTGACATCGGCCGAGCTGCGCAGCCTGGCCTGCCCCATGTGCCGCGAGCCCACCGCCCTGCCGCACGGCCGCGCCCTGCCCCGCCTGGCCACCGACACGCAGGCGCTCGGCCAGTTGCCCCCCGGCCACCGCCGCCCCCTCTCCGTGCACTTCAAACGCAGCAAGGGCCAACTGGTGGTCAAGAACGCGGCGGGGAAGCCCAAGAAGCCCGTGAAGGCGGGCGACGGCACAGGGGGCGAGGGGGTCTTGGCCGAGGGGGTGCGGGTGGGCCATTCCGGGCAGCTGACCCTGGACGTGGGTCGGCCCCCCAACCGGATGCAGAACCGCGTGCGCCAGCTGTTCCGCCGCAACGAGTGCTACTTCGGGGTGCTGGGCGTGGTGATCGTGATCATCATGGTGCTGGTGCTCACAGGCATCCTGGCCTTCGTGGTCGTGCCCAGCATCGTGGGCAACAGCCCTGCTCCATCTGCCTCTTCCAGTGAAACCCCCCAGCACTCGGGAtacccctga
>TU136306
ggaggggggagCGACAGCAGAATCTCAAGaaccagagagagcgagagagagagagaggggacccATGGAGAGAGGACACGTACAGCCTTGAACTGAAACgggaaagagagcaagagaggaggAAAAATTACCTAGAGGGAGAACTGAGAGGGAATTCAgcctggtgagagagagagagaaagtggaggaagaggaagaggagagggagaagtagaaaaataaaagggaagaGGTAGAGTGTGTCCCTGTATTGGCCGGTGGAGCAGGGCAGGGGTTTGGGGTGCTGTACCCTAGTGAACTGTAGTGTGGTGTGCTGTACTGTTTGTGTGGACTCTACTACAGTGTAGTGTGCTATAGTGCAGTATTGTGTAGCGTATGTGCTGCATCAGAGAGCTGCTGGACTGACCAAGTGGAGCCACGTCTTGGTAGACAGAGCAGGAGCACAGACAGACGGTGAGGAGGACAGGAGAGACACAACGCAGACAGAGCCTGAGCtcacagGACTGCTTCCTCTCCTGTCTCGTCTTCCTCCACCTCCCACTGAGGGCTGCCGGTCCATCGCCATGCCTACGGAGGCAGGGAATGGGGGGGACCTTGGTGATGGCAGCAGGAACCATGGCGATGGGGTCCATAGTGACAGCCAGAGACAAGAAcgacaacaacgacaacaacaacaacaacaacaacaacaacaacaacaacaacaggccCTCAAACAAGTCAGCACCACCGCAGACAAAACAGAGAGCAAGAAGACCAGAGAGAAGAAGTCTGAGAAGCGGAAGAGTTTGAAGGAGgagaggaaaaactTCAGATGTCCCTGTGTGAGTCTGCCTGTCAGCCTTGCCTTTCTGTTTCTCACACTGGAGTGACAAGGACACCTGAGATCTGGTGGGTCTCAGTGGGACTCTCCTCTTttcactgaactgaactgcaatGCAGCATCACTGAATTACTGAGACCCTGCACACAAGGGTCTGCAACcaagagagacactgagacagagacaaagacaTGAGGATACAGAGAGAGGCACAAAGTCAGTGTTGTCACAGTCGTCTCTGTGGGTGGGACGGGGTGGGACGTGGTGGGACAGGGGCGGGGAGGGTAGGAGCAGCCTGCTTGGATTTTCGgtcagtggtctggagggaaaCAAGGCCTTTTTCTTATGAGTAAATTGTATCCCCAGTGCGTGTAGACCTGATATGATGTGATGTTCTGTTTTAGTGGATGTTCACAGTATAGTGCAATAGGAGGTCCTCGCACAATTCTCAATGAACAGAAATGAAGCGCTGTGATTGGGTAGCGTTGACCTCAGCAAGCTGTAGCAGCCAGTGCAATTCCACCCTCGTTCTGGAAACTCTAGAATGTTCTTTCTCTTCTCACTTCCTTGTCTGTGTggttgtggtttgttttaagGGGCGAGGGGGAGGACAACGACATGGTGTTTACTGGGGTGCACACAGCACTGTAAATGTAtctgagtctgtgtgtgaaGGCCCTGGCTGTGCAATGCAAACCCCCCAATAAAGCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006313 False 972 mRNA 0.65 1 2020894 2021865
TU136306 True 1538 TUCP 0.51 3 2020001 2024143

Neighbor

gene id symbol gene type direction distance location
AMCG00006315 NA coding downstream 3067 2011362 ~ 2016934 (-)
AMCG00006314 NA coding downstream 20711 1991302 ~ 1999290 (-)
AMCG00006307 NA coding downstream 87599 1930634 ~ 1932402 (-)
AMCG00006305 NA coding downstream 149270 1866559 ~ 1870731 (-)
AMCG00006304 rps5,LOC106570065 coding downstream 201633 1808656 ~ 1818368 (-)
AMCG00006316 NA coding upstream 2993 2027136 ~ 2034235 (-)
AMCG00006320 NA coding upstream 73430 2097573 ~ 2099149 (-)
AMCG00006322 NA coding upstream 75024 2099167 ~ 2102889 (-)
AMCG00006321 NA coding upstream 100229 2124372 ~ 2128938 (-)
AMCG00006319 NA coding upstream 112681 2136824 ~ 2140157 (-)
G108834 NA non-coding downstream 133725 1885965 ~ 1886276 (-)
G108805 NA non-coding downstream 236435 1734195 ~ 1783566 (-)
G108789 NA non-coding downstream 298870 1719629 ~ 1721131 (-)
G108791 NA non-coding downstream 349370 1664948 ~ 1670631 (-)
G108790 NA non-coding downstream 356968 1661753 ~ 1663033 (-)
G108948 NA non-coding upstream 28848 2052991 ~ 2057622 (-)
G109090 NA non-coding upstream 322379 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding upstream 326611 2350754 ~ 2356238 (-)
G109099 NA non-coding upstream 370606 2394749 ~ 2397990 (-)
G109163 NA non-coding upstream 794326 2818469 ~ 2832329 (-)
G108829 NA other downstream 138164 1881282 ~ 1881837 (-)
AMCG00006298 NA other downstream 295153 1722561 ~ 1724848 (-)
G108784 NA other downstream 359997 1646480 ~ 1660004 (-)
G108755 NA other downstream 465337 1350485 ~ 1554664 (-)
G108938 NA other upstream 73675 2097818 ~ 2130255 (-)
AMCG00006328 NA other upstream 299988 2324131 ~ 2329991 (-)
AMCG00006344 NA other upstream 557194 2581337 ~ 2586846 (-)
AMCG00006354 NA other upstream 864343 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1674742 3698885 ~ 3728519 (-)

Expression


Co-expression Network