AMCG00006318


Basic Information

Item Value
gene id AMCG00006318
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2154397 ~ 2171374 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006318
ATGTGTCGTCCTGTCCGTGGCACGTCTCTCAGTCCCGCCTCGGTGTGTCCCCGTGTCCTGCTCGTGTCCCTCTGTGGCCGTGAGGAGAGCGCCTCTTTCTCCTGTGGGCAGCCTCTGAGCCTCTGTCTGTACAGCAGGGCAGCTGTGACTGTGTGGTTTAACCCTGCGGGCGCCGGCGCCTCTCTCCCAGTGTGTGCTGTAGAGGGCGGCACCGTGACCCCTGACCCTGCCTATGGGCCCCGAGTCTCAGCGCAGGAGCAGGAGGTCACACTGTCTGCACTGACCTTCACTGACCAGGGCTCCTACACAGTGCTGGACTCCCAGAGCAGAGCGACCATCAGCACTGTGAACGTCACTGTGACAGgTCACACAGCAAATCACATTCTGAGCTCTGGACAggacctctctctccctctgtatgGCCTCAGCAGGGCGGAGGTGCTGTTCTCCAGCAGTGCAGCCGTCTCAGTGTGCGCTGTGGAGAGCGGCGCAGCGAGCCGCCCTGGCCCCGGGTACGAGCACAGAGTGTCAGTGCAGAGCGGCTCTCTGAACCTGCGCTCACTCACTCCAGCTGACCAGGGCCAGTACACAGTGAGGGACTGCAGCaccgtctctgtgtctgtgtctccaTCCTCTCTCCGCTATGCTGCTGTTGGCCTTGCTGACTCTCACTCTGAGACTAGACGACCAGTCAGGTTATTTATGACTTCGACAAAGGCCGATTCCAGCCTGGGCCCGGGTTCGAGAATAGAGCCAAGGTTCCCCTGGAGAGGATCAGACTTCTCTCTGACCCTCCACCCCACCTGCTTCTCTGATGAAGATGTCTATGAGTGCTACGGGATCCAGAGTGACAACAAGGAGTTTCTAGGGGAAGCCCACCTGGCAGCTGTGACTGTGTGGTTTAACCCTGCGGGCGCCGGCGCCTCTCTCCCAGTGAGTGCTGTAGAGGGCGGCACCGTGACCCCTGACCCTGCCTATGGGCCCCGAGTCTCAGGGCAGGAGCAGGAGGTCACACTGTCTGCACTGACCTTCACTGACCAGGGCTCTTACTCCCAGAGCAGAGAGACCATCAGCACTGTGGCCGTCACTGTAGGACACAGTGACTCCCTCACCCTGCAGTCTGGAGccgccctctccctccccctgttCACTGCAGAGCCAGTGGaggtgctgtttgctgctgcaggagagggagcctctgtctcagtgtgcgCTGTGGAGAGGGGCGCAGCGAGCCGCCCTGGCCCTGGGTACGAGCACAGAGTGTCAGTGCAGGCCAAGGAACTGAAACTGCGGGAAATGAGAAAAGCCGACCAGGGCCAGTACACAGTCTGGAACCTGCAGGGACGCACCATCAGCACCTCAATTCGATTTTGTGAAGGCAGACTTGCCAGACCAGACACAGACCACTGGCTACAGGAACGGACTCCAGACAGCTCCTGGCCAGACCTCAGCACTGAtcacacagagagacggagCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006318 True 1482 mRNA 0.61 8 2154397 2171374

Neighbor

gene id symbol gene type direction distance location
AMCG00006317 NA coding upstream 16696 2134356 ~ 2137701 (+)
AMCG00006310 NA coding upstream 65395 2080532 ~ 2089002 (+)
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding upstream 81074 2068750 ~ 2073323 (+)
AMCG00006311 NA coding upstream 85862 2060199 ~ 2068535 (+)
AMCG00006309 NA coding upstream 108513 2042016 ~ 2045884 (+)
AMCG00006324 NA coding downstream 20151 2191525 ~ 2192885 (+)
AMCG00006323 NA coding downstream 33523 2204897 ~ 2205971 (+)
AMCG00006327 NA coding downstream 194918 2366292 ~ 2371085 (+)
AMCG00006330 NA coding downstream 220345 2391719 ~ 2396364 (+)
AMCG00006334 NA coding downstream 356857 2528231 ~ 2539840 (+)
G108884 NA non-coding upstream 24134 2128318 ~ 2130263 (+)
G108878 NA non-coding upstream 26397 2098349 ~ 2128000 (+)
G108856 NA non-coding upstream 120825 2008087 ~ 2033572 (+)
G108854 NA non-coding upstream 142589 1991615 ~ 2011808 (+)
G108847 NA non-coding upstream 201355 1952214 ~ 1953042 (+)
G108889 NA non-coding downstream 79193 2250567 ~ 2289455 (+)
G108914 NA non-coding downstream 88568 2259942 ~ 2262497 (+)
G108987 NA non-coding downstream 121323 2292697 ~ 2292896 (+)
G109004 LOC103376870 non-coding downstream 179380 2350754 ~ 2356238 (+)
G109010 NA non-coding downstream 231529 2402903 ~ 2403151 (+)
G108626 rps5,LOC107086176 other upstream 339787 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 413061 1735932 ~ 1741336 (+)
G108585 NA other upstream 724410 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 838839 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 868345 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1071563 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1103408 3274782 ~ 3286179 (+)
G109309 NA other downstream 1189980 3361354 ~ 3365565 (+)
G109362 NA other downstream 1331807 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1398665 3570039 ~ 3621796 (+)

Expression


Co-expression Network