AMCG00006324


Basic Information

Item Value
gene id AMCG00006324
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2191525 ~ 2192885 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006324
GAAAACAGTAATGATCACGTTTTGCTCTCCCTATTGTGTCTCCCAGTCTCCTCAGCATCTCCTGTCATGTTGTTAGCGAGGGTTGGGGACAGGGCCAATCTGCCCTGCAATGGCTCATCTTACAGTGGGAATGTTGAAGACGTGTCCTACATTAAGTGGCAGACGTCTTCAACTAAGCAAGTCCTTGATTATGTCTCTGGAAGAAGTTACATAGCCTCTGACTTTAAGGGCAGAGCTGAGGTCTCTATAGAGAAGATCAGACAGAGGGACTTCTCTCTGACCATTCACAGGCTCACCTTCTCTGATGAAGACATCTACGAGTGCTATTATGATACCGACTTTTATCTGACATTTCTGGGAAGTGTTCATCTCATCGTTAAAGcTCACAGTGACTCCCTCACCCTGCAGTCTGGAGccgccctctccctccccctgttCACTGCAGAGCCAGTGGAGGTGCTGTTTGCTGATACAGGAGAGGGATCCTCTATCTCAGTGTGCGCTGTGGAGAGGGGCGCAGCGAGCCGCCCTGGCCCCGGGTACGAGCACAGAGTGTCAGTGCAGAGCGGCTCTCTGACCCTGCGCTCACTCACAGCAGCTGACCAGGGAAACTACACAGTGAGGGACTCAAGGACCAACCGCACCATCAGTAGCGTCTCTGTCACTGTGAGAGGTGAGCAGTGCAGTGCGTTGCTGTTGTCCTGTGGTGTGGGGACAAGGGGCGCAGACGCACAGGGCTGCAGCTCTGAAGGGAGTCCAGCCACAACACAGGGCTTGATCCATagcacacactggcacacaggGCCCACTCACTCTGTGACCAAACTCAGAGCGTCTTTACAGAAATGCCTCTACAGTCACAGAGCAGAGCTGACAATGGTGCTGCAGTTTGGGCTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006324 True 900 mRNA 0.54 2 2191525 2192885

Neighbor

gene id symbol gene type direction distance location
AMCG00006318 NA coding upstream 20151 2154397 ~ 2171374 (+)
AMCG00006317 NA coding upstream 53824 2134356 ~ 2137701 (+)
AMCG00006310 NA coding upstream 102523 2080532 ~ 2089002 (+)
AMCG00006312 ppt2,LOC107086175,LOC101072178 coding upstream 118202 2068750 ~ 2073323 (+)
AMCG00006311 NA coding upstream 122990 2060199 ~ 2068535 (+)
AMCG00006323 NA coding downstream 12012 2204897 ~ 2205971 (+)
AMCG00006327 NA coding downstream 173407 2366292 ~ 2371085 (+)
AMCG00006330 NA coding downstream 198834 2391719 ~ 2396364 (+)
AMCG00006334 NA coding downstream 335346 2528231 ~ 2539840 (+)
AMCG00006337 NA coding downstream 396499 2589384 ~ 2594077 (+)
G108884 NA non-coding upstream 61262 2128318 ~ 2130263 (+)
G108878 NA non-coding upstream 63525 2098349 ~ 2128000 (+)
G108856 NA non-coding upstream 157953 2008087 ~ 2033572 (+)
G108854 NA non-coding upstream 179717 1991615 ~ 2011808 (+)
G108847 NA non-coding upstream 238483 1952214 ~ 1953042 (+)
G108889 NA non-coding downstream 57682 2250567 ~ 2289455 (+)
G108914 NA non-coding downstream 67057 2259942 ~ 2262497 (+)
G108987 NA non-coding downstream 99812 2292697 ~ 2292896 (+)
G109004 LOC103376870 non-coding downstream 157869 2350754 ~ 2356238 (+)
G109010 NA non-coding downstream 210018 2402903 ~ 2403151 (+)
G108626 rps5,LOC107086176 other upstream 376915 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 450189 1735932 ~ 1741336 (+)
G108585 NA other upstream 761538 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 875967 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 905473 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 1050052 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 1081897 3274782 ~ 3286179 (+)
G109309 NA other downstream 1168469 3361354 ~ 3365565 (+)
G109362 NA other downstream 1310296 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1377154 3570039 ~ 3621796 (+)

Expression


Co-expression Network