AMCG00006326


Basic Information

Item Value
gene id AMCG00006326
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2218031 ~ 2254916 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006326
ATGTTTAATGTGAAGGATAATCATCGGCCCCTGCGTTTCCACACTGGGGTCTGTGCCTCTGCCCGCTGCTCTGAGCTGCTGGAGGGACTGGGGACTgagtccagagtccagagtccagagtccagagtccagtccagagtccagagtccagagcccagagcccagagcccagagtccagagtccagtccagagtccagagtccagtccagagcccagagcccagagtccagagtccagagtccagtccagagtccagagtccagaTGTCCGTGTCAGTGGGGCACTCTGCTTCTCTGCCCTGTGATGGAGCTGTAGCTGCTGGGATTCCTGAGGAGAAACTCTACATCCAGTGGAGTACGAAGGGTCAGCTCGTCTATGAGAGTCACAATGCATCAGTCTCTTTAGGGGAAGGCTTTGAGGGCAGAGTTGAGGTCCCCAGAGAGAAGGTCAGACGGGGGGACTTCTCTCTGACCATCCGCGGCACCCTGCTCTCTGATGAAGGCCTGTACGAGTGCTTTTATGAGGGAGGGGATGCAAGGTTGATTTTCCTGACACGTGTTGATCTCACTTTTACAGCTCACAGTGACTCCCTCACCCTGCGGTCTGGAGCCAATCTCACACTCCCCCTGTACACAGCTGAGCCAGTGGAGGTGCTGTTCTCTAGCCAAGGGTCCAACTcctctgtctcagtgtgcgCTGTGGAGAGGGGCGCAGTGAGCCACCCTGACACCGGGTACGAGCACAGAGTGTCAGTGCAGAGCGGCTGTCTGACCCTGTGCTCACTCACAGCAACTGACCAGGGAAACTACACAGTGAGGGACTGCAGCACCGGCCGCACCGTCAGCAgcttctctgtCCAAGGGTCCAACTcctctgtctcagtgtgcgCTGTGGAGAGGGGCGCAGTGAGCCGCCCTGACACCGGGTACGAGCACAGAGTGTCAGTGCAGAGCGGCTTCTCCCAGGCTTTTCCCATCTCAGTGTCAGTGCCCGTGGGGGACTCTGTCTTTCTGCCCTGTTATGGAGCTGTTGCTGTTCGGATGCGTGAAGAGCAGCTGCACGTCCTGTGGAAAACTCAGAGATACACATTGATATATTCACAACATGGAAGTACCTACATCAGCCCAGGCCTCAAGGGCAGAGCTGAGATCCCCAGGGAGAGGGTTACACAGGGGGACTTCTCTCTGACCATTCGCAACGTCAGCTTCTCTGATGAAGGCCAGTACGAGTGCTCTTGCAAGGCTCATAGTGACTCTCACACCCTGCGGTCTGGAGCTGccctctccttcctcctgtTCGCTGCAGAGCCAGTGGaggtgctgtttgctgctgcaggagatggagcctctgtctcagtgtgcgCTGTGGAGAGGGGTGCAGCAATCCGCCTTGGCCCCGGGTACGAGCACAGAGTGTCAGTGTGGGCTGGCTCTCTGAACctgcactcactcactccaGCTGATCAGGGCCAGTACACAGTGAGGGACTGCAGGACCAACCAGACCATCAGCACCATCTCTGTCACTCTCATAGTGACTCTCACACCCTACAGTCTGGAgccgctctctccctccccctgttCACTGCAGAGCCAGTGGaggtgctgtttgctgctgcaggagagggagcctctgtctcagtgtgcgCTGTGGAGAGCGACGCAGCGAGCCGCCCTGGCCCCGGTGCACAGTGAGACCCTCACCCTGCCGTCTGGAGccgccctctccctccccctgttCACTGCAGAGCCAGTGGaggtgctgtttgctgctgcaggagagggagcctctgtctcagtgtgcgCTGTGGAGAGGGGCGCAGCGAGCCGCCCTGGCCCTGGGTACGAGCACAGAGTGTCAGTGTGGGCCGACTCTCTGACACTACGCTCACTCACAGCAGCTGACCAGGGCCAGTACACAGTGAGGGACTCAAGGACCAATCACACCATCAGCACCGTCTCTGTCACTGTGAGAGTCCCAGTGTCCGTGTCAGTGGGggactctgtctctctgccctgTGATGGAGCTGCAACTGCTGGGATCCCTGAGGAGGAACTCCACATCCTGTGGAGAACACTGGACGAAACGGTGATGGAATCAAGCCATGGACATGCCAACCCCGGCCGACGCTTCAAGGGCAGAGCCGAGGTCTCCAGGGAGAGGGTCAGAAAGGGAGATTTCTCTCTGACCATTCACAACGTCGCCTCCTCCGATGACGACACCTACTGGTGTTTTTACAAGAATGGAGACGAGCTGGTGTTTCTTGTATATTATCGTCTCATTGTTACAGGTGTTATTGGAGGGGCAGGAGCTGAAGATCCGCAGAGTGACTCTCAGAGATCAGGGCACCTACACTGTGAGGGATGGCCAGGGCAACACCATCAGCACCGCCAGGCCCGTGAAGAACACCTGACTCTGAGGACCAGAGACGCCTTCTCTCTCCCACTGTACGGCGGAGACGCAGTGATGGTGCTGTTCCAGAGAGCTGGTCAGCTTCCCACAATCATCCGAAACACAGGCTCTCGTGGCCCCGTGTACGACTGGAGATTCACAGTGCAGGACGACACTCTGATGCTGGACAGGGTCACTGCAGATCATGAGGGCCAGTACACTCTGCAGGACGACCAGGGAAACACCATCAGCATCGTCACCCTCACTTCTCCTCGGATCTTGTCCCGGTGTTTGGGAAATGTGGTGACTCTGTGTCTCTGCCCTGTGATGGAACAGCTGCTGCTGGGATCTGAGGAGAAAATCTACATCCAGTGGAGCACATACAGACAGATTGTGTGGGAGTTCAGCAATGGATTAGTGTTTCCAGGCCAAGACTTCGAGGGCAGAGCTGAGGTGCCACTAGAGAACATCAGACAAAGGAACTTCTCTCTGACCATTCACAACATCTCCTTCTCTGATGTAAACCTGTACAAGTGTTCATATGAGGTTAGGAATGGGTTCTTGAATTTCCTGGGAAACGTTCATCTCACTGTTACAGGTCACGAGGACTCGGTCAGTGTGCTGTACGGAGACACCCTGAGCGTTcctctgcacacacagcaggacGTGCAGGTGCTGTTCAGCCCAGGAGGAGGTATGTCTCGTGAGCTGTGCCGGGTGGACAGAGGCAAGGTCACCGCAGGACTGGACCGGGGGCAACAGGTGTCTCTGGAGGGGCAGGAGCTGTGGATCCCCAGAGTGACTCTTGGAGATCAGGGCACCTACACTGTGAGGGACGGCCAGGGCAACACCATCAGCACCGCCAGGGTCACTGTGGCAGCCCGTGAAGAACACCTGACTCTGAGGACCGGAGACGCCTTCTCTCTCCCACTGTATGGCGGAGACACAGTGATGCTGCTGTTCCAGAGAGCTGGTCAGCTTCCCACAATCATCCGAAACACAGGGTCCCCTGGCCCTGTGTATATCCACCAATTCAGACTGCAGGACGACACTCTGACACTGGACGTGGTCACTTCAGATCATGAGGTCCAGTACACTCTGAAGGACAGCCAGGGAAACACCATCAGCATCGTCACCCTCACTGTGAGCGGAGCTACTTTGTCAGTGAATATTGCGAGAATAGTATTGCTAATAGCAGGATGTATCCCTCCCTGTTTACTGTTGGGCGGCttcatgtatatgtattgtaattgtaaaagcAGCAAGGAAAGGCAAAATGAAAATGGTCACGAATTGAAGACACCACAGAAGAAGACAAAGTCCAGCAGCAGGAAGATGCCCAGCAAACATTCAGACCCCACAGAGATGTCTCAGAGATCCCATAAATCTCAGCGGCCCAAACTCTGCTCTGCTGACCAGCGCCTGGGAGGCAGGAGTGAAGAAGAGGAGGCACAGCAGGAGGAAGTGAAGGAAGTCTGCACTGCAGCACTGAACACTTTCATTCTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006326 True 3900 mRNA 0.56 17 2218031 2254916

Neighbor

gene id symbol gene type direction distance location
AMCG00006325 NA coding downstream 9147 2206607 ~ 2208884 (-)
AMCG00006319 NA coding downstream 77874 2136824 ~ 2140157 (-)
AMCG00006321 NA coding downstream 89093 2124372 ~ 2128938 (-)
AMCG00006322 NA coding downstream 115142 2099167 ~ 2102889 (-)
AMCG00006320 NA coding downstream 118882 2097573 ~ 2099149 (-)
AMCG00006329 NA coding upstream 23231 2278147 ~ 2300524 (-)
AMCG00006331 NA coding upstream 148639 2403555 ~ 2413961 (-)
AMCG00006332 NA coding upstream 285354 2540270 ~ 2550180 (-)
AMCG00006333 NA coding upstream 303959 2558875 ~ 2561435 (-)
AMCG00006340 NA coding upstream 320745 2575661 ~ 2579656 (-)
G108948 NA non-coding downstream 160409 2052991 ~ 2057622 (-)
G108834 NA non-coding downstream 331755 1885965 ~ 1886276 (-)
G108805 NA non-coding downstream 434465 1734195 ~ 1783566 (-)
G108789 NA non-coding downstream 496900 1719629 ~ 1721131 (-)
G108791 NA non-coding downstream 547400 1664948 ~ 1670631 (-)
G109090 NA non-coding upstream 91606 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding upstream 95838 2350754 ~ 2356238 (-)
G109099 NA non-coding upstream 139833 2394749 ~ 2397990 (-)
G109163 NA non-coding upstream 563553 2818469 ~ 2832329 (-)
G109294 NA non-coding upstream 1031354 3286270 ~ 3287229 (-)
G108938 NA other downstream 87776 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 193888 2020001 ~ 2024143 (-)
G108829 NA other downstream 336194 1881282 ~ 1881837 (-)
AMCG00006298 NA other downstream 493183 1722561 ~ 1724848 (-)
G108784 NA other downstream 558027 1646480 ~ 1660004 (-)
AMCG00006328 NA other upstream 69215 2324131 ~ 2329991 (-)
AMCG00006344 NA other upstream 326421 2581337 ~ 2586846 (-)
AMCG00006354 NA other upstream 633570 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1443969 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 1475126 3730042 ~ 3815517 (-)

Expression


Co-expression Network