Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006327 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 2366292 ~ 2371085 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004112 | cyclic-nucleotide phosphodiesterase activity | molecular_function |
| GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | molecular_function |
| GO:0008081 | phosphoric diester hydrolase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006327 | True | 306 | mRNA | 0.56 | 2 | 2366292 | 2371085 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006323 | NA | coding | upstream | 160321 | 2204897 ~ 2205971 (+) |
| AMCG00006324 | NA | coding | upstream | 173407 | 2191525 ~ 2192885 (+) |
| AMCG00006318 | NA | coding | upstream | 194918 | 2154397 ~ 2171374 (+) |
| AMCG00006317 | NA | coding | upstream | 228591 | 2134356 ~ 2137701 (+) |
| AMCG00006310 | NA | coding | upstream | 277290 | 2080532 ~ 2089002 (+) |
| AMCG00006330 | NA | coding | downstream | 20634 | 2391719 ~ 2396364 (+) |
| AMCG00006334 | NA | coding | downstream | 157146 | 2528231 ~ 2539840 (+) |
| AMCG00006337 | NA | coding | downstream | 218299 | 2589384 ~ 2594077 (+) |
| AMCG00006338 | NA | coding | downstream | 228169 | 2599254 ~ 2605484 (+) |
| AMCG00006335 | abcf1,LOC107745711,LOC107687077 | coding | downstream | 242007 | 2613092 ~ 2625633 (+) |
| G109004 | LOC103376870 | non-coding | upstream | 10054 | 2350754 ~ 2356238 (+) |
| G108987 | NA | non-coding | upstream | 73396 | 2292697 ~ 2292896 (+) |
| G108889 | NA | non-coding | upstream | 76837 | 2250567 ~ 2289455 (+) |
| G108914 | NA | non-coding | upstream | 103795 | 2259942 ~ 2262497 (+) |
| G108890 | NA | non-coding | upstream | 113946 | 2159977 ~ 2252346 (+) |
| G109010 | NA | non-coding | downstream | 31818 | 2402903 ~ 2403151 (+) |
| G109011 | LOC100846954 | non-coding | downstream | 64973 | 2436058 ~ 2518534 (+) |
| G109217 | NA | non-coding | downstream | 633771 | 3004856 ~ 3028646 (+) |
| G109218 | NA | non-coding | downstream | 645694 | 3016779 ~ 3069228 (+) |
| G109260 | NA | non-coding | downstream | 863820 | 3234905 ~ 3236401 (+) |
| G108626 | rps5,LOC107086176 | other | upstream | 551682 | 1637397 ~ 1814610 (+) |
| AMCG00006294 | NA | other | upstream | 624956 | 1735932 ~ 1741336 (+) |
| G108585 | NA | other | upstream | 936305 | 1350383 ~ 1429987 (+) |
| AMCG00006275 | NA | other | upstream | 1050734 | 1286829 ~ 1315558 (+) |
| AMCG00006276 | NA | other | upstream | 1080240 | 1278460 ~ 1286052 (+) |
| AMCG00006366 | NA | other | downstream | 871852 | 3242937 ~ 3252080 (+) |
| AMCG00006368 | NA | other | downstream | 903697 | 3274782 ~ 3286179 (+) |
| G109309 | NA | other | downstream | 990269 | 3361354 ~ 3365565 (+) |
| G109362 | NA | other | downstream | 1132096 | 3503181 ~ 3506679 (+) |
| AMCG00006379 | NA | other | downstream | 1198954 | 3570039 ~ 3621796 (+) |
