AMCG00006330


Basic Information

Item Value
gene id AMCG00006330
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2391719 ~ 2396364 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006330
ATGGACTGTGACTCCCGTCCACTCATATGGGCAGCGGCTGACCAGCCCAGCTCCACTAACAGTCCAGGAGCAGGCAAAGCACCCATTCAGCACAACTCCGCCAGCTCGCCAGTGTGTCTCCCAGTCCCCTCCACTCCTGTCTCTGTATCGGTCTCAGTGGGGGACTCTGTCACTCTGCCCTGTAATGGATCAGCCTACAGATGGACTCCTGAGGACCAGATCTATGTTAAATGGCAGACAAATAGCCGGCGAGTCTTTGAGTTCAGTTATGGGCAGTTGTACCCCGGCGCCGGGTTTGAAAACAGAACCGAGATTCCCCTGGAGAGGATCAGACAGGGGGACTTCTCTCTGAGCCTCCAGCACACCTCCTTCTCTGACCAGGAACGCTTTGCGTGTTACTcTCACAGTGACTCCCTCTCCCTGTGGTCTGGAAccgccctctccctccccctgttCACTGCAGAGCCAGTGGaggtgctgtttgctgctgcaggagagggagcctctgtctcagtgtgcgCTGTGGAGAGCGACGCAGCGAGCCGCCCTGGCCCCGGGTACGAGCACAGAGTGTCAGTGCAGAGCGGCTCTCTGACCCTGCGCTCACTCACAGCAGCTGACCAGGGAAACTACACAGTGAGGGACTCAAGGACCAACCGCACCATCAGCACCGTGTCTGTCAATGTTAATGTTACTGTGGGAGAGAGTGGCCTTGCAGGATGGGCCATCGCTCTGATAGTGATCCTCACCCTGGTCCTCATAGCCATCACTACACTGCTGTGGAAAATGAAGACTAAATGTTCATCTCTTTGTGAGCAAGGACATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006330 True 828 mRNA 0.57 5 2391719 2396364

Neighbor

gene id symbol gene type direction distance location
AMCG00006327 NA coding upstream 20634 2366292 ~ 2371085 (+)
AMCG00006323 NA coding upstream 185748 2204897 ~ 2205971 (+)
AMCG00006324 NA coding upstream 198834 2191525 ~ 2192885 (+)
AMCG00006318 NA coding upstream 220345 2154397 ~ 2171374 (+)
AMCG00006317 NA coding upstream 254018 2134356 ~ 2137701 (+)
AMCG00006334 NA coding downstream 131867 2528231 ~ 2539840 (+)
AMCG00006337 NA coding downstream 193020 2589384 ~ 2594077 (+)
AMCG00006338 NA coding downstream 202890 2599254 ~ 2605484 (+)
AMCG00006335 abcf1,LOC107745711,LOC107687077 coding downstream 216728 2613092 ~ 2625633 (+)
AMCG00006336 ppp1r10 coding downstream 245048 2641412 ~ 2649109 (+)
G109004 LOC103376870 non-coding upstream 35481 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 98823 2292697 ~ 2292896 (+)
G108889 NA non-coding upstream 102264 2250567 ~ 2289455 (+)
G108914 NA non-coding upstream 129222 2259942 ~ 2262497 (+)
G108890 NA non-coding upstream 139373 2159977 ~ 2252346 (+)
G109010 NA non-coding downstream 6539 2402903 ~ 2403151 (+)
G109011 LOC100846954 non-coding downstream 39694 2436058 ~ 2518534 (+)
G109217 NA non-coding downstream 608492 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 620415 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 838541 3234905 ~ 3236401 (+)
G108626 rps5,LOC107086176 other upstream 577109 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 650383 1735932 ~ 1741336 (+)
G108585 NA other upstream 961732 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1076161 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1105667 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 846573 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 878418 3274782 ~ 3286179 (+)
G109309 NA other downstream 964990 3361354 ~ 3365565 (+)
G109362 NA other downstream 1106817 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1173675 3570039 ~ 3621796 (+)

Expression


Co-expression Network