AMCG00006332


Basic Information

Item Value
gene id AMCG00006332
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2540270 ~ 2550180 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006332
ATGGCGTCCGTTCTAATCGGAGCTTCCGCCCAAACACGGAACATCCGCAGCACAATACGCTCGCACTCGCTCTGGTACCTCTTCACACTGACCACGGGACAGACTGACCTCCCAGAGCTGGTTGTGGTGCAGATGGTGGATGACGTGCAGATGGAGTACTATGACAGTACGGTGAAGAAGCCGCTCTCTCGCCGGCACTGGGCCCCTGACTCGGATACGGTGGAATATGCCGAAAGAAAGGTTGATGGATGTATGCGAACTTACTACAGCATGAAAGAAAAACTGCAGAGAATCATGCCGCGCTTCAACCACAGCGGAGGTCTTCACACCTACCAGAGGATAGCTGGCTGTGAGCTGGATGATGACGGCACAGTGCGCTTTAAGGCAGTGGATGCCTATGATGGCCAGGAGGTGATGAGCTACGACCCGCAGGCCTACAGGTGGAACACCCTTGTGCCCGACAGCCTGATAGACCAACTGATGCTCAAAGTCAATAGAGCTATAGATGAAAACATCTACCAGCCCTGGTGTGTGAGAATACTGAAGAGCCACCTTCAGCAGGAAAATCATATAGTCAACAGGAGAGTGAAGCCCAGAGTCAGGGTGTTCTCCAAGGGGGCGGAGGTGGTCTGCCTGGCGACCGGCTTCTACCCACGGGCTGTGGAGGTGACCCTGTTGAGAGACGGCCAGCCCGTCCCAGAGCAGCAGCTAAGAGGGGGGGAGGTGCTGCCCAACGGAGATGGGACCTACCAGCTGAGGAGGAGCCTGACTGTCAGCACACAGGAGCAGAGAGAGCACCAGTACTCCTGCACGGTCACTCACAGCAGCATGGACAACAAGCTGGACATGGACTGGGATCCGCAGCCTGAGCAGGGCACTGGGCTCCTTGCTGGCGCAGTGATGGGGGCTCTGCTGGTCTTGctgatcatcatcatcattggaATCTTGAtctggaggaggaagaggaaagcAGCAGgggctggactggactgcaggaCTGGTGCTGCTGTGAAGTACAGCGCTGCCCACAGATCAGACGGAAAGAGCAGCAGGTCTTCAATCAGCTCTGTGTCTGAATCAACCACTACACACTGACAGAGGACTGCAACATGGatagagctgtgtgtgtgtAAGCAGATGGTGAGAGCAGCGTGTCTTCAAACAGCTCTGTTTCTGATGGAGGACTGCAACATGGCTagatctgtgtctgtgtgtttgtgtgtgtctgtgtgtgtaaatgttgcATGATGGATATCTGATGGAATAATACAGGAATTAAAACTGTAAGGTTCTAATCAATTAGAAACAGGGTTTAATGGGGACAAATTATACACAGCTGTGACATGTGCTCTTCTGTCAACAGGATGCATTGCATTCCCtgacatattgaaaaatatctaCATAGTCTTCCTGCTGCCGGTGGAGCAGCGGCCATGTCGGGCCCTATCTAAGTACAATTCATCTAGGCACGCTATATACTCCAAATCCTTCTTAAAACTCTCCCAGTTTCACTCATCTCTCTCCCGCGGCGGACTGCAGGCCGTCTTGTTTAGACTCTCCCGCCCAGCGCCCTCTATGATGTTGTTGAACACGGCTGCCATCTTACGCCTCGTCTCGTTTTTCCACGGTGTCGCCTTGTTAACTTTTCTCTCGCAATGTCTCAGCTCCTCCAGTGCTGCCCTCACACTCTGTCCTTCCCTATCGTGTTTGGGCATCGCTCTGAAGCGCTCTGTTGTCTGCCTCATCTTGAGACCAGCCATGTAGGTTGCATGCCACCCCACGTCTCTGACACCATTGTAGCGAACAGGggtctcttttatttatttttaaatgacggACAGCAGACAGTTCAGAGCAACATTGGGAGTTTATTGCCCTTATTAACACAGAGCTAGAGATCTATTTTGGCTGGGACCCACgccaaaacaataacaaataaccCTGTGCTCTATTAACACTcgctcactcacacacagctctcACTCACTCTTGCTGCTCCTCGCCAACTCACTCCTCAGTCCTGATCCCCTCCTCTCAATTCCACGCCAGACACACCCCCCAGCACACACTCTCCTATCACTACGCTCAAACAGTCTACCTGTCAACCCAGCCTGCCAGGTCACTACAAAAACTTTAATCACTGAATGCACTTTAAGTATATtagttacatttctgaaaaacttAAACAGTATCCCTCCTTAATTGACCAATAAGCTACCGTATTTAGCATTCAGCTTTATAATATGCACAACTCTATGTTATTTTTcgaaatttaaatattttgtattatgtttgaCAGACATATTAACTTTTTATAATCATATGATAAATtaacaacaaattaatacaaagaaaCGTCAGGACGGCTTTGATGGTGATGGCTCATCTCCCGCCCATCAGTGAGATTTGTTTGTAATCCTCAAAAATGTTGGTGTTCAGATAGATCTGAATAGAAAATTGCTTCTGGTCCTTCTTGGTTTTGAGGCCTGCATTCAGATCATGTCACGTATCATTCTGCCATCTTTTATAGATAATGATTTTCACCCGGCAGTCTGCAATATTATACCCACAAGGCTGATCAAAGACTGACCGCAGTCCCTTCAGCTAAACCCCATTTAACAATCTCCTAAGTACTTTCAATGTCtctttgtatgtgtatgtattaatttatatcatTTGTACATGTAATGTAATTCTACATACGTATTGGTCTCACAGTgaagttttaataataaacagcagattaattaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006332 True 2752 mRNA 0.48 8 2540270 2550180

Neighbor

gene id symbol gene type direction distance location
AMCG00006331 NA coding downstream 126309 2403555 ~ 2413961 (-)
AMCG00006329 NA coding downstream 239746 2278147 ~ 2300524 (-)
AMCG00006326 NA coding downstream 285354 2218031 ~ 2254916 (-)
AMCG00006325 NA coding downstream 331386 2206607 ~ 2208884 (-)
AMCG00006319 NA coding downstream 400113 2136824 ~ 2140157 (-)
AMCG00006333 NA coding upstream 8695 2558875 ~ 2561435 (-)
AMCG00006340 NA coding upstream 25481 2575661 ~ 2579656 (-)
AMCG00006342 NA coding upstream 56042 2606222 ~ 2609426 (-)
AMCG00006343 NA coding upstream 78315 2628495 ~ 2631707 (-)
AMCG00006341 NA coding upstream 100448 2650628 ~ 2659502 (-)
G109099 NA non-coding downstream 142280 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 149718 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding downstream 184032 2350754 ~ 2356238 (-)
G108948 NA non-coding downstream 482648 2052991 ~ 2057622 (-)
G108834 NA non-coding downstream 653994 1885965 ~ 1886276 (-)
G109163 NA non-coding upstream 268289 2818469 ~ 2832329 (-)
G109294 NA non-coding upstream 736090 3286270 ~ 3287229 (-)
G109322 LOC103376870 non-coding upstream 789938 3340118 ~ 3433270 (-)
G109334 NA non-coding upstream 817017 3367197 ~ 3369548 (-)
G109432 NA non-coding upstream 998434 3548614 ~ 3561944 (-)
AMCG00006328 NA other downstream 210279 2324131 ~ 2329991 (-)
G108938 NA other downstream 410015 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 516127 2020001 ~ 2024143 (-)
G108829 NA other downstream 658433 1881282 ~ 1881837 (-)
AMCG00006298 NA other downstream 815422 1722561 ~ 1724848 (-)
AMCG00006344 NA other upstream 31157 2581337 ~ 2586846 (-)
AMCG00006354 NA other upstream 338306 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1148705 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 1179862 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 1602636 4152816 ~ 4158123 (-)

Expression


Co-expression Network