AMCG00006334


Basic Information

Item Value
gene id AMCG00006334
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2528231 ~ 2539840 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006334
ATGCTAAAATTGGCCGGCGCAGGGAGCACCCCTGGGGCGGTGACGCGGCGGGAGGTCCAGCCCGGGGACTCCATGACTCTGCCCTGCGACGTGTCCTATGAGTTTGAGACTATGTGGTTCTGCCAGTGGCCGGGAGAGACTCCAACACTAGTTGTCACCGTCAAGACCGGGATCTCTGGTACCGAACTACTGCCGTTCACCTTCCCAGAATCTGGCTTCAAGAGCCGCTTCCAGCCAGTGTTGAACTACAGTAGTGGCGCCATATCCCTAAGGATTGACAACATCACGGCGGGGGATCTGGCGCTATATTTCTGTGCCGACCGGTACTCCGGTGGGATGAAGTTCGGGACTGGAACCAGACTGGTGTTCGCAGGAATGAAGTCCTTTCAAAAGGATCCAACCCTGGACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006334 True 411 mRNA 0.57 3 2528231 2539840

Neighbor

gene id symbol gene type direction distance location
AMCG00006330 NA coding upstream 131867 2391719 ~ 2396364 (+)
AMCG00006327 NA coding upstream 157146 2366292 ~ 2371085 (+)
AMCG00006323 NA coding upstream 322260 2204897 ~ 2205971 (+)
AMCG00006324 NA coding upstream 335346 2191525 ~ 2192885 (+)
AMCG00006318 NA coding upstream 356857 2154397 ~ 2171374 (+)
AMCG00006337 NA coding downstream 49544 2589384 ~ 2594077 (+)
AMCG00006338 NA coding downstream 59414 2599254 ~ 2605484 (+)
AMCG00006335 abcf1,LOC107745711,LOC107687077 coding downstream 73252 2613092 ~ 2625633 (+)
AMCG00006336 ppp1r10 coding downstream 101572 2641412 ~ 2649109 (+)
AMCG00006339 NA coding downstream 124973 2664813 ~ 2668215 (+)
G109011 LOC100846954 non-coding upstream 9697 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 125080 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 171993 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 235335 2292697 ~ 2292896 (+)
G108889 NA non-coding upstream 238776 2250567 ~ 2289455 (+)
G109217 NA non-coding downstream 465016 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 476939 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 695065 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 800249 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 1008774 3548614 ~ 3548988 (+)
G108626 rps5,LOC107086176 other upstream 713621 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 786895 1735932 ~ 1741336 (+)
G108585 NA other upstream 1098244 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1212673 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1242179 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 703097 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 734942 3274782 ~ 3286179 (+)
G109309 NA other downstream 821514 3361354 ~ 3365565 (+)
G109362 NA other downstream 963341 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 1030199 3570039 ~ 3621796 (+)

Expression


Co-expression Network