AMCG00006337


Basic Information

Item Value
gene id AMCG00006337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2589384 ~ 2594077 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006337
GCAATCACTCGCTGTCTATCTTGTACACACTTATGATGGGACACACACACTTCCCCGAATACGTGGTAGTGATGAAGGTGGATGACGTTGTGATGGAGTACTACGACAGCACGCTGAACAAGATGGTCTCTCACTGGCACAGAGGTGCAGCCCCCGACACCCTTGAGTTCATTGAAGACAAGATCACCCTCATTCTAAACTTTCAGTATGGAATGAAATCACGTATACAACAGCACATGTTGCACTTTAATAACAGTGGAGggctTCACACCTACCAGAGACTGGCTGGTTGTGAACTGGATGATGATCAAAAAGAGCAGTTCTGGGATGCAACTGCCTACAATGGGATGGAGGTGCTGCGCCTTGATCAGAAGACTTTAATATGCAATGCAGTTAATCCTAATGGATGGACTAACATGAAGTCAGTGGAGTTCAATAAAGTGCTATATAGTGAAATATACAAGCCCACATGTATGAAAGTATTGAAGACATTCCTTCAGCAAGATGAAAATGTTAAGATTTGGAGAGAGAAGCCCAGAGTCAGGGTGTTCTCCAGGGGTGGCAGGGGTGGCAGGGGCTCCAGGGGGGCGGAGGTGGTCTGTCTGGCAACTGGCTTCTACCCCCGGGCTGTTGAGGTGACCCTGCTGAGAGACGGCCAGCCCATCCCAGAGCAGCAGCTGAGCGGGGGAACGGTGCTGCCCAACGGAGACGGGACCTACCAGCTGAGGAGGAGCCTGACTGTCAGCATACAGGAGCAGAGAGAGCACCAGTACTCCTGCACGGTCTCTCACAGCAGCATGGACAACAAGCTGCACATGGACTGGGAGTTGCAGCCTGAGCTGGACGCTGGGCTCCTCGCTGGCACTGTGATGGGGGCTCTGCTGGCCTTACtgatcatcatcatcgtcatcttCATCTggagaaggaagaggaaaaTGGCAGggCCCGGACTGGACTGCGGGACTGGTGCTGCTGTGAAGTACAGTCCTGCCCACAGTGAGTACCAGTGTACTGTACACAGTGTCTGTGACTGGCCCCAGGGCCACAGTGACTACCAGTGTCAGTCACCTTTCCAGGAGCCACCACTTCAAAGCTGCCCCTCTgacctctgtgtctctgtcttacaggaggagcagagagggagggagagggacaaaGCAAcacatcttcatcttcatcttgaGACAGCTCCTCAACACCATCTTAAACAGGAACTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006337 True 1220 mRNA 0.52 5 2589384 2594077

Neighbor

gene id symbol gene type direction distance location
AMCG00006334 NA coding upstream 49544 2528231 ~ 2539840 (+)
AMCG00006330 NA coding upstream 193020 2391719 ~ 2396364 (+)
AMCG00006327 NA coding upstream 218299 2366292 ~ 2371085 (+)
AMCG00006323 NA coding upstream 383413 2204897 ~ 2205971 (+)
AMCG00006324 NA coding upstream 396499 2191525 ~ 2192885 (+)
AMCG00006338 NA coding downstream 5177 2599254 ~ 2605484 (+)
AMCG00006335 abcf1,LOC107745711,LOC107687077 coding downstream 19015 2613092 ~ 2625633 (+)
AMCG00006336 ppp1r10 coding downstream 47335 2641412 ~ 2649109 (+)
AMCG00006339 NA coding downstream 70736 2664813 ~ 2668215 (+)
AMCG00006345 NA coding downstream 135960 2730037 ~ 2751105 (+)
G109011 LOC100846954 non-coding upstream 70850 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 186233 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 233146 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 296488 2292697 ~ 2292896 (+)
G108914 NA non-coding upstream 326887 2259942 ~ 2262497 (+)
G109217 NA non-coding downstream 410779 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 422702 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 640828 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 746012 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 954537 3548614 ~ 3548988 (+)
G108626 rps5,LOC107086176 other upstream 774774 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 848048 1735932 ~ 1741336 (+)
G108585 NA other upstream 1159397 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1273826 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1303332 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 648860 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 680705 3274782 ~ 3286179 (+)
G109309 NA other downstream 767277 3361354 ~ 3365565 (+)
G109362 NA other downstream 909104 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 975962 3570039 ~ 3621796 (+)

Expression


Co-expression Network