AMCG00006338


Basic Information

Item Value
gene id AMCG00006338
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2599254 ~ 2605484 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006338
GGCTTGCTGTGCTCCCCAGGCATGGCAAGAAATGGGCCTCTAATTCTTATGCTACTAGCTCTCCCAATAGcaTTCTCTCCACCTCTGAAAAGAAAGCAAGGGGAGGTATCAGCAAAGATCGGGGACTCGGTCACACTGCCCTGCAATGGGACGTCCCACACAGGGGTCCGCGAGAAGGAGCCTTACATCTTTTGGCAGACTCCCGAAAAGAAGGTCTGTGAGTTCAAGAATGGGTCATTCGCTGTCGCCACTGCGTTCAAGGGCAGAGTTGAGATCTTGGGAGAGAAGGTCAGACAGGGGGACTTCTCTCTGACCCTCCACAACGTCACCTTCTCTGACCAGTGCCAGTATGAGTGCTACAACAGAGGACAACACATCATCACCTCCTGGCTACAGATAACAGAGCCAGTGGaggtgctgtttgctgctgcagaAAAGGGGgcctctgtctcagtgtgcgCAGTGGAGAGGGGCATAGTGAGCCGCCCTGGCCCCGGGTACAAGCACAGAGTGTCAGTGCAGAGTGGCTTTCTGACACTGAGCTCACTCACAGCAGCTGACCAGGGAAACTACATAGTGAGGGACTGCAGCACCGGCCGCAACGCCAgcactgtctctgtgtatgtggcAGACCTGGCTTCTCCTGGGGATTCCTCAATCTCCAATTCCATTGCCTTCTCAGTGCTGGGCTTTGTGGCAGGGGCGTGCGGTGAGCGTGCAAAGGCCCAGAGACTCTGGCCCCCGGTGACCCGGCAGTGGAACGCACCCCACCTTCAGACCCTTGATCGGGGCCATTGCTTTATGGAGTGCACTAGTTTTGGATTCAGGCTGTACAACGTCACTCCACGTCTCTCAGCTCTGACCAACAGatcctccctccccttctctttcAACTCTAACCACTACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006338 True 909 mRNA 0.56 5 2599254 2605484

Neighbor

gene id symbol gene type direction distance location
AMCG00006337 NA coding upstream 5177 2589384 ~ 2594077 (+)
AMCG00006334 NA coding upstream 59414 2528231 ~ 2539840 (+)
AMCG00006330 NA coding upstream 202890 2391719 ~ 2396364 (+)
AMCG00006327 NA coding upstream 228169 2366292 ~ 2371085 (+)
AMCG00006323 NA coding upstream 393283 2204897 ~ 2205971 (+)
AMCG00006335 abcf1,LOC107745711,LOC107687077 coding downstream 7608 2613092 ~ 2625633 (+)
AMCG00006336 ppp1r10 coding downstream 35928 2641412 ~ 2649109 (+)
AMCG00006339 NA coding downstream 59329 2664813 ~ 2668215 (+)
AMCG00006345 NA coding downstream 124553 2730037 ~ 2751105 (+)
AMCG00006349 NA coding downstream 189762 2795246 ~ 2801973 (+)
G109011 LOC100846954 non-coding upstream 80720 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 196103 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 243016 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 306358 2292697 ~ 2292896 (+)
G108914 NA non-coding upstream 336757 2259942 ~ 2262497 (+)
G109217 NA non-coding downstream 399372 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 411295 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 629421 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 734605 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 943130 3548614 ~ 3548988 (+)
G108626 rps5,LOC107086176 other upstream 784644 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 857918 1735932 ~ 1741336 (+)
G108585 NA other upstream 1169267 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1283696 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1313202 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 637453 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 669298 3274782 ~ 3286179 (+)
G109309 NA other downstream 755870 3361354 ~ 3365565 (+)
G109362 NA other downstream 897697 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 964555 3570039 ~ 3621796 (+)

Expression


Co-expression Network