AMCG00006339


Basic Information

Item Value
gene id AMCG00006339
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2664813 ~ 2668215 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006339
gagagagagaaagagagaaggagaaagggagagagaaattgGAGGTTAATTCAGTGTCTGAAAACTACAGtatatcagagagagagagtgagagggtgtgagttttatttcagattttactATGATGCAAAACACAGTCATTGTAATTTGCACTTTGGTCAGCCTCTCTCACAGCATTGTTGCCCAGAGAGTCTACACCTCTGTCGGGGGCACAGCTCTCCTGCCCTGCAGGGACAGGAGGGCAGTGGAGAAGGCAGGCACTGTCCAGTGGGAGCACACTGCCGTGGAGGGAGTGCAGTCACGCAGAGTGCTGACCGAGGGCCGATTCACCCTGAAAGCACGCGCCGCACTGCAGATCAGCAACGTCCAGCTCTCAGACGCAGGGATCTACTACTGCGGCCAGGGAGCAGGCAGCGACCTGCTGGTTCTGCAGGtgacctctgacccctctGACCCCCTTCCTGATGACTGGGTCATTGTGACATGTGACGTGAAGTGCCCTCGAGACTGTGGACACTACATCCTCAAGATGAACAGCACAAGACAGACCCAGCCCAGCGGAGCCCCTCCTCAGGACTTTTTCCAATTCCAAGAGACGGACCGCGGCAAGACATTCCGTTGCTGGCTGGAGGTCAATGGCCTCCCCCAAACGGACGTCTCCTTTGGGTTGGCCATCCAGAACCACACAGCTACTCTAAGCCAAGTCCAGTCCCTCCACTCTGGCTTGGACAACCTACAGGACAACCTCTTCGATGTGAGGAAATCTCTAGTTTCTCAGAGCGTCTCTTCTGCACGTCTGCTGTGGGACCTCGCTGCTGTGGATGCTGCTTCTCGGCTTGGCCCGGCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006339 True 850 mRNA 0.55 4 2664813 2668215

Neighbor

gene id symbol gene type direction distance location
AMCG00006336 ppp1r10 coding upstream 15704 2641412 ~ 2649109 (+)
AMCG00006335 abcf1,LOC107745711,LOC107687077 coding upstream 39180 2613092 ~ 2625633 (+)
AMCG00006338 NA coding upstream 59329 2599254 ~ 2605484 (+)
AMCG00006337 NA coding upstream 70736 2589384 ~ 2594077 (+)
AMCG00006334 NA coding upstream 124973 2528231 ~ 2539840 (+)
AMCG00006345 NA coding downstream 61822 2730037 ~ 2751105 (+)
AMCG00006349 NA coding downstream 127031 2795246 ~ 2801973 (+)
AMCG00006350 NA coding downstream 133855 2802070 ~ 2807457 (+)
AMCG00006351 NA coding downstream 141125 2809340 ~ 2811305 (+)
AMCG00006348 NA coding downstream 144116 2812331 ~ 2813489 (+)
G109011 LOC100846954 non-coding upstream 146279 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 261662 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 308575 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 371917 2292697 ~ 2292896 (+)
G108914 NA non-coding upstream 402316 2259942 ~ 2262497 (+)
G109217 NA non-coding downstream 336641 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 348564 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 566690 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 671874 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 880399 3548614 ~ 3548988 (+)
G108626 rps5,LOC107086176 other upstream 850203 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 923477 1735932 ~ 1741336 (+)
G108585 NA other upstream 1234826 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1349255 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1378761 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 574722 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 606567 3274782 ~ 3286179 (+)
G109309 NA other downstream 693139 3361354 ~ 3365565 (+)
G109362 NA other downstream 834966 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 901824 3570039 ~ 3621796 (+)

Expression


Co-expression Network