AMCG00006340


Basic Information

Item Value
gene id AMCG00006340
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2575661 ~ 2579656 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006340
ATGCCAGGAGTGGGCCGAGTGTGGGGGTGGCTGGCACCCGCTTTCTCCTACCGCCCTTGGAGGGAGAAGCAGAGTGCGAAGGACAGCGATggagaggaggtggaggaatgggagatgaagaaaaaagaggaggaggagaggagcagGATGGAGCTGAAGCAGGGTGGTTGGAACTGGGGATGGGGTTGGGGATTGGGGGGCTGGTGGtggaggagaaagaaagaggtcCCAGGATGGGAGATGgacactgagagggagagagagttaaaggaggagggggaggacgCCATGGAGTGGAGGACAGTAGAACAAGTTGAGGCGGAAGAAGTGACCAAGAGCGCCCTGgagaggaggtggtggtggaaAGTTGTCCCCTCTCCCCCAGGCTGGCTGCGACTCTGGCCCAAGCAGGAGGTGACCAAATCGGGGAGCGCTGCAGGAAACGTGGAGGCTTCATTGGGGCCCACTCTGGCCTTCACGACCATGCCTCCTTCACccaccacctccacctccacctcctcctcgtCCTGGGCGCTGCTCCAGAGCCTGTACCAGACCTGGGAGGGCTGTGCGGTCCTGCCCCATCACTACGACATCTGCTTCAACTTCTTGCGCCACCTCTTCGATCTCTTCGTGGTGGGCTTCCTGTGGGCCACCTCCACCCCCGTCCGTGTGGTGCTGGACGTGCTGGGCGTGCAGGGCGCGGTGAAGCTGTGGCTCCATGGGATGGCGCTGTTCTTCGTGTCCTCCGCGGGAATGGCTGGCTTCCTGTGGCTCATCCAGGCCTACCTGCCCCAGTTCGCCCTGGTCTATGGCATCCTGCAGGGCCTGGTGATCTCTGTGAGCCTCAGGCAGAGCGTACTGCTGGGGGAGGCCGACGCAGAGGAGGGGGAGCGGGAGCAGAGAGAGGCGCcgctgggagaaggagaaggggagCTGGTGGctgaggagggagaggaaggggagagcggggagagagagatgacgAAGAGGAAGTGCAGAAAGAAACCACTTGAAGAGaagccccccaccccaactCCTGACCAGAGCCTGTGACCCCCCACTCCCCCGGAGCCGGAGCCTTCAGCCCCGTGGATCTGCGATTGTCTGTCTCCAAGAACGTTTGTGACTCCTGTTCCTGGATCTTGACACTGTACCTCTGAAATTGTGAGACATTGAATGAGAAATGCTACCATATTTTCCACCACTATCGTCACTAATATCAACTGTTACTACattgactaataataataatactgttccTCATTTTGCACAGACAATGCTTAGTCTTCAGAGAGTAATCTGCCGATTCGAGCGCATTGATGGCTGATGCCtggattcatatatatttatatatatttgttttggtttgttctttttttttctttaagtgcCAAACGTACCTTCCATGTTAATCCAGGTGAAAGATTTTGTCTTCTGATGCTCAAAAAATATGAGGAATAGAACTGATACGCCCTTTCCACAAAGAGTGGTAGGGGTGTGGAGTCCCCTGCCAGGACGCACTGTTCATATGGATGCAGGCTGAGAGTCGGGCGCACTCTCTGCGGAGAACCCCGGTGTGTGCAGGCTGTCCCTGCCGGCTCTCTGGTGACAATGACAACTGCAGAGTCTCAGTGTGGGGTTTTAACCAGGATGCACATGTTCAAGTGGAAGCTGTTTCTCTGTATGCTGGCACTACCGATTCCCCTCCCAGTTCCTCCTACGCTGCTGCTGGGTGCACTGGGAAACAACGCCAGCTGCCCCGGCTCCAGGCCTGCTGGGTGGTGAAAACGGTGTGCTGAAGAACATGGGACGTGTGGAAGATCATGGGACACAGCATCCGTATTGAGAGTCCATATGATGTGTGAGGGGATCGTGTTCCTCACAGTCCTGGTtgcgtgtatgtatgtgtgtgtgtgtgtgtgcgtgccaAATATCTTTACTCCACAGTGGATAGATGTCACAGTCCAGCTGCTTCTAAGAGGGAAACTGACTATAATGACCTGGACTGGGACACTGCAGAGACTTCacgtccctctctctctctctggagtgGAGAGACTGTGTGGATTGTATTGTTTATGGACTTGTACTGGGCCAATCACTATcaatatcttgtttttttttaaggagatttatttgtgttttaatttttgtttcccTTGTTTGAATGGTACTCAGTGGGATTTTTGAGTTTGATAACACTGTCTTTGTACACACTacattacacagacacacaccaccCTCTACCTTTCCATCTGTCTCCCAAACTCCCCCGCTCTTTGTTGCCCTcttattttctctccctttccaggtctcctgtctctctctctgcccactTTTCCATCTTCCCTCCTACTTCTTTACaatgtgctctctctctctctgtgccttcCCCTCCCTCCATCACAGTTCACATCTCATACCTTTTCTCACCCTGTTTCCAGATTAATATAACCTTAAATACAtgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006340 True 2472 mRNA 0.53 2 2575661 2579656

Neighbor

gene id symbol gene type direction distance location
AMCG00006333 NA coding downstream 14226 2558875 ~ 2561435 (-)
AMCG00006332 NA coding downstream 25481 2540270 ~ 2550180 (-)
AMCG00006331 NA coding downstream 161700 2403555 ~ 2413961 (-)
AMCG00006329 NA coding downstream 275137 2278147 ~ 2300524 (-)
AMCG00006326 NA coding downstream 320745 2218031 ~ 2254916 (-)
AMCG00006342 NA coding upstream 26566 2606222 ~ 2609426 (-)
AMCG00006343 NA coding upstream 48839 2628495 ~ 2631707 (-)
AMCG00006341 NA coding upstream 70972 2650628 ~ 2659502 (-)
AMCG00006357 NA coding upstream 384659 2964315 ~ 2964962 (-)
AMCG00006355 NA coding upstream 386162 2965818 ~ 2970452 (-)
G109099 NA non-coding downstream 177671 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 185109 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding downstream 219423 2350754 ~ 2356238 (-)
G108948 NA non-coding downstream 518039 2052991 ~ 2057622 (-)
G108834 NA non-coding downstream 689385 1885965 ~ 1886276 (-)
G109163 NA non-coding upstream 238813 2818469 ~ 2832329 (-)
G109294 NA non-coding upstream 706614 3286270 ~ 3287229 (-)
G109322 LOC103376870 non-coding upstream 760462 3340118 ~ 3433270 (-)
G109334 NA non-coding upstream 787541 3367197 ~ 3369548 (-)
G109432 NA non-coding upstream 968958 3548614 ~ 3561944 (-)
AMCG00006328 NA other downstream 245670 2324131 ~ 2329991 (-)
G108938 NA other downstream 445406 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 551518 2020001 ~ 2024143 (-)
G108829 NA other downstream 693824 1881282 ~ 1881837 (-)
AMCG00006298 NA other downstream 850813 1722561 ~ 1724848 (-)
AMCG00006344 NA other upstream 1681 2581337 ~ 2586846 (-)
AMCG00006354 NA other upstream 308830 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1119229 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 1150386 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 1573160 4152816 ~ 4158123 (-)

Expression


Co-expression Network