AMCG00006341


Basic Information

Item Value
gene id AMCG00006341
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2650628 ~ 2659502 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006341
GCCCAGCAGCTGGCCACCCCAATCACCAGCGCTGCCAAGATGCAGTCAAATCGCCATCACCTgggCCGGGGCATGGCAGTGGGATTTCTCAAAGTGGGCTACAAGAAGCTTTTCCTGCTGAACCACAGGGGGGCGCACCTGGAGACAGAGCCACTGTGTGTGCTGGACTTCTACATCAGCGAGAGTCTGCAGAGACACGGCTATGGCAAAGAGATCTTCAACTACATGCTGGAGTGTGAGCGAGTGGAGCCCCAGCAGATGGCCTTTGACAGACCTTCTCCCAAGTTCCAGTCCTTCCTGAAGAAACACTACAGCCTGGAGCACTGTGTCCCCCAGgtcaACAACTTTGTGGTGTTTGACGGCTTCTTCAGGGAGAAATCAGTGGTTCAAGTGAGAAAGCTCCCCCCTCGAAAGCCAGAGGGAGAGATCAAGCCATACTCCCTGTCGGAGAGGGAAGcTCTGAGGGAGGAGCAGAGGACTCTCCCCTGGCCGTTCAGTCGAGccaccctctccccccccccctcctcctcctcctccatgaacCGCTCCCTCAGCGTGGGCTCCTCCCCATCGCACGGCCCCCCCCGGCCACCCCCCGGCCTCAGCGCCCTGCGGCTGGAGAGGCCCCGCCCTCCCCAGTTCAACGGGGTCTCGGCCCTGCAGGACAGCGCCCCCCACAGGACACGCAGGACCAGCCCCGATGGGCCAATGGCACAGTCTCCAGCCCCTGGCATCTGGCCTGTTGCCATGCCCAGTGTGACAGAGACGCAGTCCAACCGCTTTCTAGACGTCCACTCGAGGCTGGAGCAGGAGCAGCCGCAGACTGGTGCCAGGCCGCTTGGGGTGCACTTCCCCGCGCTGGTGGAAATGGGCCAGAGCAGTGCCGGCCGAGCCCGGGTCCCGGAGCCGAGTCTTCCGGGCTCCCCCCAGTGCCCCCCCTCCCGCTCGCCCTCCCCCCTGCTGAGACGGACTCACGGTCACACCCGGGTCCCCTGACCCCCCCGGCCCCTCGGCACCCCAggagagagggcgagagagaCCGGgaccgagagggagagggagagggggagggagggagagagaggcgcCAGCACCCCCCCTCAGGCACAGAGCCCCCCCAGGCCCCCCATAGCCCCCCAACCTCCTGGACCGTGGGGGGGCAGCCCTGTACAGCCCAGTGGGTGAGAAGGAAACAGGAGAACAGGAGCACTAGGCCCTGGTgaagtgagagaggagagagatgggggaagGGAGAAGGTAGGGCAGGTTAAAGAAGTAGTGTAAATCAGAGAGAGGGATGTCTAGTGTAGGAACAGACAGGAggaagagggaagagagagagagatcgggCTGTAGAGGAAGTGAGACTGGGCTGCTGATGCTCTGCACAGATAATCTGTTCCAGGTTCCTTATTCTGTACAGGGGtcagtgtcacacacacacctacagaaATATTCATATACACAATCCCttgttaatttataatatatttgaattatattgcAATGAGCTactccttttgtttttgaagatacAGCACACAAACCCAGTGGTTGCAAATTctacacacacaatgtatttattttaatatttgattttgtattttttatgtatttttggagTGTGATAATTTTATTCAGTGGCATTACGTacctgttttcaaaataataaattccattaatttatttgcaca

Function

GO:

id name namespace
GO:0070507 regulation of microtubule cytoskeleton organization biological_process
GO:0071929 alpha-tubulin acetylation biological_process
GO:0048666 neuron development biological_process
GO:0019799 tubulin N-acetyltransferase activity molecular_function

KEGG:

id description
K19573 ATAT1, MEC17; alpha-tubulin N-acetyltransferase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006341 True 1694 mRNA 0.58 10 2650628 2659502

Neighbor

gene id symbol gene type direction distance location
AMCG00006343 NA coding downstream 18921 2628495 ~ 2631707 (-)
AMCG00006342 NA coding downstream 41202 2606222 ~ 2609426 (-)
AMCG00006340 NA coding downstream 70972 2575661 ~ 2579656 (-)
AMCG00006333 NA coding downstream 89193 2558875 ~ 2561435 (-)
AMCG00006332 NA coding downstream 100448 2540270 ~ 2550180 (-)
AMCG00006357 NA coding upstream 304813 2964315 ~ 2964962 (-)
AMCG00006355 NA coding upstream 306316 2965818 ~ 2970452 (-)
AMCG00006356 NA coding upstream 315195 2974697 ~ 2982807 (-)
AMCG00006361 NA coding upstream 453041 3112543 ~ 3117675 (-)
AMCG00006363 NA coding upstream 460775 3120277 ~ 3124200 (-)
G109099 NA non-coding downstream 252638 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 260076 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding downstream 294390 2350754 ~ 2356238 (-)
G108948 NA non-coding downstream 593006 2052991 ~ 2057622 (-)
G108834 NA non-coding downstream 764352 1885965 ~ 1886276 (-)
G109163 NA non-coding upstream 158967 2818469 ~ 2832329 (-)
G109294 NA non-coding upstream 626768 3286270 ~ 3287229 (-)
G109322 LOC103376870 non-coding upstream 680616 3340118 ~ 3433270 (-)
G109334 NA non-coding upstream 707695 3367197 ~ 3369548 (-)
G109432 NA non-coding upstream 889112 3548614 ~ 3561944 (-)
AMCG00006344 NA other downstream 63782 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 320637 2324131 ~ 2329991 (-)
G108938 NA other downstream 520373 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 626485 2020001 ~ 2024143 (-)
G108829 NA other downstream 768791 1881282 ~ 1881837 (-)
AMCG00006354 NA other upstream 228984 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1039383 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 1070540 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 1493314 4152816 ~ 4158123 (-)
G109633 NA other upstream 1505432 4164934 ~ 4165600 (-)

Expression


Co-expression Network