AMCG00006342


Basic Information

Item Value
gene id AMCG00006342
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2606222 ~ 2609426 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006342
ATGGCTGTTTGCCGGAGGGGCGTGGCTCTGCGGGGATGGGTGGTGGTAGCTGGGGCAGGGGGTGCCCCGGCTGTCCGCTGTGGGCGCAGTCAGTGTTGCCCGAGGGTGGAGGGAAACCAGCTGTGGAGTCTGACCCAGAGACCTGATTGGTGGTACAGCAGTCATGCTCGCCCAATCAGCAGCCTGCCCTGGGCCATGTCCACGCCCACCTGCCTGCGCTACCAAACCGCCAACCAACTGAAGCTGGAGCCCTACCCTCGCGGCGGAGAGCCAATCAGACCTCAGACCTGCCGAGAAGCCCTTGCCCGACTGGACCCCAACGAGACTGTCAGCCTCTGCCTGCTCCTGGGGGGCAGGGAGTGTGAGGGGCAGCGCACCCTGGTGGAGGTGCCCCTGTGTGGGCTGGCGGGGCTGGGTGAGCTCCTGGCTTCGGGAGCGGTCAGGCCGGAGGAGCTGTCGCTGCGGCAGCTGGTGGGCACGGTCACCACCGTCGACGGAGCGCGGGAGGACGACATCACCGTGACGGCCGTGCCGGTGGAGGGGAAGGTGGGGGATTCGTTCAGGAGCCTGTTCTGGCAGGAGAGCTGCCCAGCCCCCTTCATGGGGGGGTCCCGGTTCTACTGCTTCCACTCTCCCGAGGTGCAGCCCTTTCTCCTGGGCTTCAGGGACAGCTCTGGGCGGGGGAATGAACTGAGACTGCAGGCCTCGGCCCCCACCTCCCCGGGGGGCCGCAGGGACAGGGAGATGGAGGAGAAGTTGGCCCTGATGTACGATCGGCTGCGCGGagagACTTGTGCCCCCCCTCCACCAGTACTGCCTGCTGATGGTGCTAAAAgctcttgtctgtctgtctgtctgtctgtctgtctgtcccagcTGCCCAACTTCTTCCTGAAGACCCATGACTACAGCATCTACTCTCAGGACATGGAGTTCATCAACAGCTTCTTCCACACCAAGACCAGGGGCCGCGTGCTGTACCAGCTGTCCCTGGCGCTGTGCAGGATGGTGTGTGTGCTGTACTTCACGGAGGTGCGCATGGAGGTGCTGAAGCTGACGCAGCACAGCGAGGACCTGAGCGTCCGGGCGCGGTGGAGGATAAGGGGGCTGCCACTGCACTTGCTGCTGCTACGCTTCTACAGGAGGGACAAGAGGGAGCTGTACAGgacaTACGATGCATTCTCAACCTTCTACCTGGGAGCAGATGGACTCATACATTGTCACCGAGTGGACAAGgtgatGCCAGCCCAGCCGCCCCTCCCCAGGCTGAAGGCCGTGCTGGCGGGGGCTCTGGTGGCTCTGGGCCTGCAGGAACAGCGTCCCCCCGCCCTCAACCTGCTGCCCCTGCTGCTCAGCCAGCTGGTCCTGCGGCTGGGAAGGGGGCACTgctga

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function
GO:0019001 guanyl nucleotide binding molecular_function
GO:0001882 nucleoside binding molecular_function
GO:0001883 purine nucleoside binding molecular_function
GO:0032549 ribonucleoside binding molecular_function
GO:0032550 purine ribonucleoside binding molecular_function
GO:0032561 guanyl ribonucleotide binding molecular_function

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006342 True 1392 mRNA 0.65 6 2606222 2609426

Neighbor

gene id symbol gene type direction distance location
AMCG00006340 NA coding downstream 26566 2575661 ~ 2579656 (-)
AMCG00006333 NA coding downstream 44787 2558875 ~ 2561435 (-)
AMCG00006332 NA coding downstream 56042 2540270 ~ 2550180 (-)
AMCG00006331 NA coding downstream 192261 2403555 ~ 2413961 (-)
AMCG00006329 NA coding downstream 305698 2278147 ~ 2300524 (-)
AMCG00006343 NA coding upstream 19069 2628495 ~ 2631707 (-)
AMCG00006341 NA coding upstream 41202 2650628 ~ 2659502 (-)
AMCG00006357 NA coding upstream 354889 2964315 ~ 2964962 (-)
AMCG00006355 NA coding upstream 356392 2965818 ~ 2970452 (-)
AMCG00006356 NA coding upstream 365271 2974697 ~ 2982807 (-)
G109099 NA non-coding downstream 208232 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 215670 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding downstream 249984 2350754 ~ 2356238 (-)
G108948 NA non-coding downstream 548600 2052991 ~ 2057622 (-)
G108834 NA non-coding downstream 719946 1885965 ~ 1886276 (-)
G109163 NA non-coding upstream 209043 2818469 ~ 2832329 (-)
G109294 NA non-coding upstream 676844 3286270 ~ 3287229 (-)
G109322 LOC103376870 non-coding upstream 730692 3340118 ~ 3433270 (-)
G109334 NA non-coding upstream 757771 3367197 ~ 3369548 (-)
G109432 NA non-coding upstream 939188 3548614 ~ 3561944 (-)
AMCG00006344 NA other downstream 19376 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 276231 2324131 ~ 2329991 (-)
G108938 NA other downstream 475967 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 582079 2020001 ~ 2024143 (-)
G108829 NA other downstream 724385 1881282 ~ 1881837 (-)
AMCG00006354 NA other upstream 279060 2888486 ~ 2894534 (-)
AMCG00006390 NA other upstream 1089459 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 1120616 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 1543390 4152816 ~ 4158123 (-)
G109633 NA other upstream 1555508 4164934 ~ 4165600 (-)

Expression


Co-expression Network