Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006348 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 2812331 ~ 2813489 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0008237 | metallopeptidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006348 | True | 249 | mRNA | 0.51 | 2 | 2812331 | 2813489 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006351 | NA | coding | upstream | 1026 | 2809340 ~ 2811305 (+) |
| AMCG00006350 | NA | coding | upstream | 4874 | 2802070 ~ 2807457 (+) |
| AMCG00006349 | NA | coding | upstream | 10358 | 2795246 ~ 2801973 (+) |
| AMCG00006345 | NA | coding | upstream | 61226 | 2730037 ~ 2751105 (+) |
| AMCG00006339 | NA | coding | upstream | 144116 | 2664813 ~ 2668215 (+) |
| AMCG00006346 | NA | coding | downstream | 19016 | 2832505 ~ 2846173 (+) |
| AMCG00006347 | NA | coding | downstream | 52814 | 2866303 ~ 2882217 (+) |
| AMCG00006358 | NA | coding | downstream | 94683 | 2908172 ~ 2934561 (+) |
| AMCG00006352 | NA | coding | downstream | 123454 | 2936943 ~ 2944472 (+) |
| AMCG00006353 | NA | coding | downstream | 141846 | 2955335 ~ 2960532 (+) |
| G109011 | LOC100846954 | non-coding | upstream | 293797 | 2436058 ~ 2518534 (+) |
| G109010 | NA | non-coding | upstream | 409180 | 2402903 ~ 2403151 (+) |
| G109004 | LOC103376870 | non-coding | upstream | 456093 | 2350754 ~ 2356238 (+) |
| G108987 | NA | non-coding | upstream | 519435 | 2292697 ~ 2292896 (+) |
| G108914 | NA | non-coding | upstream | 549834 | 2259942 ~ 2262497 (+) |
| G109217 | NA | non-coding | downstream | 191367 | 3004856 ~ 3028646 (+) |
| G109218 | NA | non-coding | downstream | 203290 | 3016779 ~ 3069228 (+) |
| G109260 | NA | non-coding | downstream | 421416 | 3234905 ~ 3236401 (+) |
| G109301 | LOC103376870 | non-coding | downstream | 526600 | 3340089 ~ 3393931 (+) |
| G109389 | NA | non-coding | downstream | 735125 | 3548614 ~ 3548988 (+) |
| G108626 | rps5,LOC107086176 | other | upstream | 997721 | 1637397 ~ 1814610 (+) |
| AMCG00006294 | NA | other | upstream | 1070995 | 1735932 ~ 1741336 (+) |
| G108585 | NA | other | upstream | 1382344 | 1350383 ~ 1429987 (+) |
| AMCG00006275 | NA | other | upstream | 1496773 | 1286829 ~ 1315558 (+) |
| AMCG00006276 | NA | other | upstream | 1526279 | 1278460 ~ 1286052 (+) |
| AMCG00006366 | NA | other | downstream | 429448 | 3242937 ~ 3252080 (+) |
| AMCG00006368 | NA | other | downstream | 461293 | 3274782 ~ 3286179 (+) |
| G109309 | NA | other | downstream | 547865 | 3361354 ~ 3365565 (+) |
| G109362 | NA | other | downstream | 689692 | 3503181 ~ 3506679 (+) |
| AMCG00006379 | NA | other | downstream | 756550 | 3570039 ~ 3621796 (+) |
