AMCG00006358


Basic Information

Item Value
gene id AMCG00006358
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2908172 ~ 2934561 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006358
ATGGAACCAGAACCCGGTTGCTGCTACAAGAACTTAAGACTGACTCCATCTATCCAGACAGTCAGCCCCAGAGCGGGAGAGTCTTTCAGTTTCCATTGCTCCCACTGTGACAGTACAGAGCCACCAGCAACTGGCTTTGACTGGAGCCTCAATGGACAGCCCATCAATGGAGACTCTGAGGGATTTGTGGTGGGGGAGAAGAATCTGATGATACTGAGAGTGGATGAGAGGCATGAGAGGCAGAGTGACCTGTGGCTCTGGGGGTCAGAGGACAGAGCTGTGCCTGACAGTGGACAACACATCACTTGGGACCACTGCCACACCCCCACCTGGAGACCCCACACTGGGCCACTCCACTGCGTCACCCTGCTCTACACCGGCGCTAAAGTCTGCGTCCTGACTGCGATGATCCTGGCTGTGGTCGTGTGTGAGATCAAGGCCCAACGTGGAGGACCAAAAGTCATCTGGGTCTGGAAGCCCAGCTACCCTGGGTGTGCTGGAGTGGAGGGGACATGGCAGCTGATCTACAGAATTGACAGGAGAGGAAACCACACAGAGTCAGACAGGTTTAGGAGCAGACTGAGAGTGACTGAACATCATGACCTTACACTGGAGCTGAAGAACGTGGTCATGAGTGATGCTGGAGTGTACATCTGTTCTGATCATACAGAATATAAGGAATTTGTTCATCTGGATGTGACTGCAGGCTGCTACAAGAATTTAAGACTGACTCCATCTAACCAGTCAGTCAGCCCCAGAGTGGGAGAGTCTTTTAGTTTCCTTTGCACCCACTGTGATGGTACAGAGCCACCAGCAACTGGCTTTGACTGGAGCCTCAATGGACAGCCCATCAATAGAGGCTCTAGGGAAGTTCTGCTGGGAAAGAAGTATCTGACTATACAGAGAATGGATGAGAGCCATGAGGGCAGAATGACCTGTGGCTCTGGGGGTCAGAGGACAGAGCTGTGCCTGACAGTGGACAACACATCACTGGGGACCACTGCCACACCCCCGCCTGGAGACCCCACACTGAGCCACTCCACTGCTTTTGAATCCTGTCTGCTGGTTCTTCTCTACACAGCAGCTCCCCCTGTCCAGATCAGAGTCACCCTGCTCTACAGCAGCGCTAAAGTCTGCATCCTGGCTGCGATGACCCTTTCTGTGGTGGTATGTGAGATCAAGGCCCGACGTCAAGCGGCTCCCCCTGTCCACATCAGCGTCACCCTGCTCTACACCGGCGCTAAAGTCTGTGTCCTGACTGCGATGATCCTGGCTGTAGTGGTGTGTGAGATCAAGGCCAGAGGACGAGGGAACAGGAAAGGGCACCTCTACACCACACAATTCCCCAGGGAGGTGGATCCTGGGAAGCTCAACACAGACAccagAGGACGGGAAATCAGCTGGGAGTGGGAGCCCAGATACCCCAGGTGTGCTGGAGTGGAGGGGAACTGGCAGCGGATCTACAGCATCGACAGGAGGGGAAACCACACAGTGGAATCACACAGGTTTAGGAGCAGACTGAGAGTCAATAGTTATAATATACTGGTGCTGAAGGACATTGTCATGAGCGACGCTGGGCTGTACAGCTGTTCTGATATTGTTGGGTATAAGGACTACATTAATCTGCATGTGACTCAAGGCTGCTACAAGAACTTAAGACTGACTCCATCTAACCAGTCAGTCAGCCCCAGAGTGGGAGAGTCTTTCAGTGTCCTTTGCTCCCACTGTGACAGTACAGAGCCACCAGCAACTGGCTTTGATTGGAGCCTCAATGGACAGCCCATCAATGGAGACTCTGAGGGATTTATGGTGGGGGATAAGACTCTGACTATACAGAGAGTGGATGAGAGCCATGAGGGCAGAGTGACCTGTGGTTCTGGGGGTCTGAGGGCAGAGCTGTGCCTGACAGTGGACAACACATCACTGGGCACCTCTGCCACACCCCCACCTGGAGACCACACCCCTGCGACCCCCCCACATGGAGACCACACCTCTATCACACCTCCACCTGGAGACCCCACCTCTGCCACACCCCTGAAGGCAGATCAAACTTCTACCACACACCCACCTGGAGACCACACCTCTGCCACACACCCACATGGAGACCACAGCTCTGCCACTCCCCCGCCTGGAGACCAAACTTCTGCCTCACCCTCGCCTGGAGACCCCACCTCTGCCACACCCCTGAAGGCAGATCAAACTTCTACCACACACCCACCTGGAGACCACACCTCTGTCACACCCCCACATGGAGACCAAACTTCTGCCACACCCTCACCTGGAGACCCCATCTCTGCCACACCCCCAAATGGAGACCAAATTTCTCCCCTTGTCCAGATCAATGGCTCCCCTGCCTTCACCCAGCTCTACATAGTGTGCATCCTGGCTGCAATGATCCTGGCTGTGGTGGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006358 True 2415 mRNA 0.55 10 2908172 2934561

Neighbor

gene id symbol gene type direction distance location
AMCG00006347 NA coding upstream 25955 2866303 ~ 2882217 (+)
AMCG00006346 NA coding upstream 61999 2832505 ~ 2846173 (+)
AMCG00006348 NA coding upstream 94683 2812331 ~ 2813489 (+)
AMCG00006351 NA coding upstream 96867 2809340 ~ 2811305 (+)
AMCG00006350 NA coding upstream 100715 2802070 ~ 2807457 (+)
AMCG00006352 NA coding downstream 2382 2936943 ~ 2944472 (+)
AMCG00006353 NA coding downstream 20774 2955335 ~ 2960532 (+)
AMCG00006359 NA coding downstream 54582 2989143 ~ 3001290 (+)
AMCG00006360 NA coding downstream 159521 3094082 ~ 3111575 (+)
AMCG00006364 NA coding downstream 216511 3151072 ~ 3177539 (+)
G109011 LOC100846954 non-coding upstream 389638 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 505021 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 551934 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 615276 2292697 ~ 2292896 (+)
G108914 NA non-coding upstream 645675 2259942 ~ 2262497 (+)
G109217 NA non-coding downstream 70295 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 82218 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 300344 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 405528 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 614053 3548614 ~ 3548988 (+)
G108626 rps5,LOC107086176 other upstream 1093562 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1166836 1735932 ~ 1741336 (+)
G108585 NA other upstream 1478185 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1592614 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1622120 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 308376 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 340221 3274782 ~ 3286179 (+)
G109309 NA other downstream 426793 3361354 ~ 3365565 (+)
G109362 NA other downstream 568620 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 635478 3570039 ~ 3621796 (+)

Expression


Co-expression Network