AMCG00006359


Basic Information

Item Value
gene id AMCG00006359
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 2989143 ~ 3001290 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006359
GGCAGCTGTGCCGCGCCTCGCCTGACTCAAATACAGACACCGAGGCAGCACCGCTGTCATGAAGGCTTTTTAACACCAAGTAGTGCCACTGGGTCACGATACGTTACTCAGACTGGCAGACAGATGCGTGAACACACGTCTGCATTAAGCTGACAGCGACCACGCACAACAAGTCACATATAAGGGATACAGGCGTTTGACGAAGACAGCCCCGCTTGGTCTGTTTGTAGGAAGTTCCAGGGTCCTGGGCGCTGTGGCTGTGTTTGAGTATCCGGCCTTTGGAGACGGGCGGCGAGAGAGGGGGCGAGACGGCGCAGAAACAATCCACCGACTAATTACGGACGAAACCCCAAAACGCCCCCGTTAGCGGAGTCGACACGGCCTTAACTAGCGGAGCCCGGCTGCGACAGGGGAGATAATAAGGAGAAACGCCGCTGTTCTGTTGTCCTGTTGCGTCTGCGCGGGTCTGGGCTGAGGAGTAGCAGCGCAGTTGTACGGAGGGGGCAGGATGGTGGAGCCGGGGAAAATCGATGTGACGGTGAAGACACTGGACTCCCAGAGCCGCAGTTACAACGTGGGGGAAGAGATCACAGTGAAGGAGTTTAAGGAGCACATAGCCAGCTCCGTGGGGATTCCTGTGGAGAAGCAGAGACTGATCTACCAGGGCCGCGTGATTCACTTGGTGGAACGCGCCCCGCCCCAGACCACGCAGCCGGGGGGAGCCGGGGGCAGCGGCACCTCCGGGACGGGGGTGTCACCCCCCCCTCACTCCTCTTCCACagccccccccggccccccccACGACCGCAACGCCAACAGCTACGTGATGCTGGGCACTTTCAACCTGCCTGTCAACATCATGGACCCCCAGCAGATACAGagTAATGGCTCAGTGGATGTCCATATAGATGTGGAGCAGGCCATTCAGAGCGAGCCCCGGATGCGCCTGGTTCTGGCACAGAACCTCCTGAGGGACACGCATCACGTCATCGACAGGCTGGAGgGTCAACCCAGTGGTATGGACCAGGAGCCCCAGTCCACAGAGAACCCCTCGTCCCAGACGCAGACCACCCCCACTGCCCCGCCCCCGCAGTCCTCCCCCACAGAGCCGCCGACCCCCGACAGTGAGGGTGGGGCTCAGCCCATGGACACTTCCCCCCCGCCGCcaccttcctcctcttcctcctcctcctcctccacacagACTGAGGGACCACCCCACTCCGGACCCAATCACCCATCCCCGGTGGAGTTCATGGAGGTGCTGTGTGAGCTCCGGCAGGTGGAGGACCGGCTGCAGCCCTTCGTCCAGCGCACACACCAGATCCTGGGCTCTGCCACCAGCGCCGACTACAACAACAATactCAAGAGCGTGAAGAGGACCAGCTCACACTGAACCTGGTGGGGGAGGCCCTGCGCTTCCTGGGCAATGCTCTGGTGGCCTTGAGTGACCTGCGCTGCAACCTGTCGTCCACCCCCCCCCGCCACCTGCACGTGGTTCGGCCCATGGCTCACTATGCCTCCCCTATAAACCTGGGCACCACGGTAACCATGACCGCCAACGGCAGACAGGCGGCCGAGGGGCAGGCCGCTCCCGGAGCCACGCCCACCAGCACGTCCTCGGAGCAGCCAGGAGGGCCTCAGTCACAGACCCCGCCCGCACAGGGCTCCCAGGCCAATCAGACGGGCTCCCAGGCCCAGCCCACCTCGCAGGCACAGCCCCCTCCCGGCACGCAGCCCCGCGTCATCCGGATCACTCACCAGACCATGGAGCCGATGGTCATGATGCAAATGAACATCGACGACTCTGGCACAGGCACTCAGACTACAGGATCAGCTTCTACAGGCGCCCCTGGTCAGTCTCCCGGTGGCGCCCCTCCCCTGCAGATCCCTGGCCTGCCCCCGGAGTTTATGCAGGCCATCGTGCACCAGATCACCCAGCAGGCCCTCAACATGGCGACGGCTGCCACGGGGGGGATGGGCGTGCCCGGCGGTGGTGCGGTTCCGGGGCAGCAGGGCCAGGggggacagcagcagcagcagcagcagcagcagggtggCGTCCCCATGCCCGGccccttcccccctccccaGGCTAGAGTGTTGCTGATGCCGGTCCACATGACCACCGCAGGTGAACACAccacctcctcttcctcttcctcctcctcttcattcTCCTTCTCTAgctcctcatcctcctctggCACCGCTGCCCCGCCCCCTTCCTCCTCgtcctctccccccccctcctcgGCCAGCACCTCCGGTCAGACGTCCACGAACACCACCAGCACGGCCTCCACCGgccacccctcccccaccgCGCCCCCCCCGCCCTCGGACAGCGCCCCTCAGCCCCCACAGGCCAACCTGGCCCAGCTGCTAGGCTCCCTCTTGGGGGGGGCAGCCGGCGGGGTGGCGGCTGCCGGGGCGGGTGCCGGGATGGGAGCGGGAGGAGTCCCCCCCTCGATCACAGTCACCATGCCCGGAGTCCCGGCCTTCATCCAGGGAGTGGCGGACTTCATCCAGgcCGCCCAGCCCGtcttcccccctcctccctcccagGCCCCCGACCAACCCCCCCATCCGCAGCACGGCACCCCTCACAcccaccctccccccccctcaTCCGCCACCACTCCCTCCTCAGGACCCCCCCCGGCCGTGGTCCCACCCCAGGCACAGGCTCCCCCTGGGGGCCCCCCCCTGGGCGTGGGTGCAGGGGGTGAGTCGCTGAGCCCCGAGGTGTTCACGGGCATCGTGCAGGGGGTGCTGTCCTCCATGATGGGCTCCCTGGGCTCCCCACAGGGCAGCAGCGAGAGCATCGCCGACTTCATCCAGCGCCTGTCCCAGACCAGCAACATCTTCGAGCCCGGCTCCGGTGCCGCCATAGggTTCTTCGGGGACCTGCTGTCTCTGATCTGCCAGAGCTTCTCCATGGTGGACATGGTGATGCTGCTCCACGGCCAGCACCAGCCCCTGCAGCGCATCCAGCCGCAGCTCCGGGCCTTCTTCACCGAGCACTATCTGCAGGAGCGCGAGCCCAGTGACGCCAACATCCGGgcgGCTGCGGAGGATCTCATCAATGGACTAGAGGAGTACATCACAGAGAGCTTCtccaCAGTCAGTGTGCGTGAGGGGGTGAACATCACTCAGACCAACATGGAGTTCCTGACGGAGCAGTTCACACGCATCGCCACACACATCCTGCGCTGCTCTGACCAGTCTTTCGGGCAGCGGCTGCTGGAGCTGTGTAACCAGGGCCTGTTCGAGTGTCTGGCCCTGAACCTGTACTGTCTGAGGGGGGAGCAGAGCGCCTTAACCGCCGTCATCAACCACCGGATCGTGAGTGCGCTGTCTGTCCCCGTCCGCTCTGTGTCGCTGCCTCACTCGCTCcgcactgctctctctcctgcatcTACACTGTCGCTGCGTagctccctccctcactctttATTGACCCTCTCTCAGAGGAGGATGTCTGCAGAGGTGAACCCCTCTCTGGTCAACTGGCTGACCACCATGATGGCCATGAGGCTGCAGAGCGAGCCGGCCGAGGAGGAGCAGCCAGAGCCCCCCGCTGAGGAGGAGCCCCCCAGCACCGAGTCTGTCCAGATGGAGGAGTCCTCCGCGTCCCCCACTCCAGCCACAACTGCTGAGGAGGCCATGGCATCAGCGGGGGAGACCGTCGCAATGGCAGCACAGAGGGAGGAGGCGGAGTCCGAGCCCTGGGCAGCGGCCGTCCCCCCGTCCCAGAGGAAGATGAAGTCCCAGCCGCCCCTCAGTGACGCCTACCTCAGCGGCATGCCGGCCAAGCGCAGGAAGacTGTGCAGAGCGAGGGGCCACACCTGACCCTGTCGGAGGCGGTGGGCAGGGCGGCCCGCTCAGCCGGGGTGAAGCCCGTCACCAGCACCGACAGCCTGCAGGGGGAGTTGGAGCGGCcggagctgcaggaggcctATACAGAGCAGGTCAAGTCCGACATCAAGAAGCGGCTGCGAGACGACCCCGACTACAGCACACAGCGCTTCCCCAACACGCACCGCGCCTTCTCTCCGGACTCCTAACACCGCGGCCGCCCCCGTCTCCCCGCAGTCTCGAGACGCACGTCCTCTGAGCCTCTCCCCTCGGTGGACACACGGTGAAGCTCGCCGGTTCCCGAGGGACCTCTcgcatcccccccacccctctgtaGCCACTGGCCGGGGCTCCCCTGTCCATCACACCTCCCGGTCTCCCTATTGGACAGGCACGTCCAATATCACCCCAGCGGCCTCTGCTGTCAATCACAGGCCCCTTGTTGTCCCTCCCTTTCTCCACATCTACTGGCTGCATGCCCCATCAATCAGAATCTCCTGCCTCCTGATTGGCAACTCACTCAGAATGCTGTCTCTGTAACTCCTATACTCAGTGCTCtagggggatttttttttttcggttcTGTAAATTATATAAGACTACAACGAAATTGAACGGTGCTCGCTATGGATagtcttggggggg

Function

GO: NA

KEGG:

id description
K23390 BAG6; large proline-rich protein BAG6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006359 True 4508 mRNA 0.65 24 2989143 3001290

Neighbor

gene id symbol gene type direction distance location
AMCG00006353 NA coding upstream 28611 2955335 ~ 2960532 (+)
AMCG00006352 NA coding upstream 44671 2936943 ~ 2944472 (+)
AMCG00006358 NA coding upstream 54582 2908172 ~ 2934561 (+)
AMCG00006347 NA coding upstream 106926 2866303 ~ 2882217 (+)
AMCG00006346 NA coding upstream 142970 2832505 ~ 2846173 (+)
AMCG00006360 NA coding downstream 92792 3094082 ~ 3111575 (+)
AMCG00006364 NA coding downstream 149782 3151072 ~ 3177539 (+)
AMCG00006367 NA coding downstream 218929 3220219 ~ 3232977 (+)
AMCG00006370 NA coding downstream 291453 3292743 ~ 3301359 (+)
AMCG00006373 NA coding downstream 341249 3342539 ~ 3349221 (+)
G109011 LOC100846954 non-coding upstream 470609 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 585992 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 632905 2350754 ~ 2356238 (+)
G108987 NA non-coding upstream 696247 2292697 ~ 2292896 (+)
G108914 NA non-coding upstream 726646 2259942 ~ 2262497 (+)
G109217 NA non-coding downstream 3566 3004856 ~ 3028646 (+)
G109218 NA non-coding downstream 15489 3016779 ~ 3069228 (+)
G109260 NA non-coding downstream 233615 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 338799 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 547324 3548614 ~ 3548988 (+)
G108626 rps5,LOC107086176 other upstream 1174533 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1247807 1735932 ~ 1741336 (+)
G108585 NA other upstream 1559156 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1673585 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1703091 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 241647 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 273492 3274782 ~ 3286179 (+)
G109309 NA other downstream 360064 3361354 ~ 3365565 (+)
G109362 NA other downstream 501891 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 568749 3570039 ~ 3621796 (+)

Expression


Co-expression Network