AMCG00006360


Basic Information

Item Value
gene id AMCG00006360
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3094082 ~ 3111575 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006360
TCCAACTGAAtctgatttcattatttcaggTAAAAACGATCATAAAGATGACAACCATTCAGgTAAAAACGATCNNNNNAATCACCATCTGCAGCCCCTGTTCCATggAGTAAGATTAAATACCCTGCGGTGGGAGGAGGAGTGCTCATACTGGTCTGTGTGGTTGTGCTGATCGTGTGCTACTGCAGGAGGTGCAGAAATAAAGgCTCCATGGACACATCGACAGACTATGCTGTCGTACACGTGCCTCAGATAACAGAAGAAGGGGACCCAGACTACACTGAGATAAAGGACCTCAAACCAGCTGAAGAAGCAGCTGTAGAAGCGAATGCTGAATCTGACTACGCCGTCATCAGTGAAGCAGAAGCCAAGCAAGCCGGCGATCAGGGCTCTGACTACGCTCTGGCCCAGGCCCCGCAGACGGCTAAGGAAGGTCCAGCCTCTGTCCAGGACTCAGATTACTCTTCTGTTCAGCCTCCCAAGGATGTTGAGAAAGAGACAACCGGCAGTCCGAATTCAGACAACTCTGTGGCTCCCGAGACAGCTGGGAAGGGACCTGAGCACAGAGGAGCCGAGACTGTCTAGAGGAACCCACTGAACATTTACACACCCACTGTTACCAgatactgtttgttttttcccggTTAGTTAAAGTATATCATGCTCAAATGTGCAATTCGGGAGCTATTGTATGTAATGTACAGGTGTCACACAGACAGGATGCTTATGCAATAAGATGGTTATTTGACTCTGCTTTCATTATAGTTGTGAAATAGAGGGTTTGACAAGCCTTGTTACATGTTTACACCATGTTATAGTGTAAAACAAGCCACTGGTGAACTTACCAGGGTAAGAGTGCATAAAGGAGGGAAGTAAAGCCTTTGGCCTCAGCCCTTGTTCTCTCCTTCTTCTCAGGGGATTCACACatgatcaaaacattgacctccCTGCTAATCATAAACCTGACAAGCTGTAACCTATCACAGTATACAGTGACGtctacaatacattaaactatttataacTCAAAACATGATAGGGCACAACTTTGAAGGTGATTTGCAGgagggtcaatgttttgatttggtctctAAGACAATCAGGAATGTGCCGCCAGTGCCGAACAAACTAACCCTGTAATTATAATAGTTATATActcctttaattattatttttttgtaaatgcccttacccagggcaacttacagtttactaaagaagcattttaaagctTTACAAATGTTCAGTAATTTgtaagttatatatttatatttttcaatgagttttgtaaaaaatatgtgTGATGTAATCACATCCTACAGAGCCGGAAAGTGGCAACACATGGCAATCTTTGTACATAGAActctattttatatattgaatcTGCTTGATAGATAGAAAGAAAGGTAGAAAGGTAGGGAGGTTGATGAAGAGAAGTCAGTAGGTAGATATAGACagaattcatttaaaaaggcaaactAGCAAGATGGCAAGTTGTTTTCTTGGTGTATGTTGCTGTACATGATGACAGTTTGTGGCTGCTGATGCGTTGTATTGTCGATCGCTGTTGAGTCTTTATTATTTAAGGTAAGCTTGTGTAAAATAAAGTCAATCAGGGAAATGAAAGTGTGTATCAATTGTCCTTCGCTGATGGGGATTGTCACTGGTCTGGCTGTTTTCACACAGCTGGAGTCATTGGCAAACTGGCCACTGGCTCTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006360 True 1721 mRNA 0.42 11 3094082 3111575

Neighbor

gene id symbol gene type direction distance location
AMCG00006359 NA coding upstream 92792 2989143 ~ 3001290 (+)
AMCG00006353 NA coding upstream 133550 2955335 ~ 2960532 (+)
AMCG00006352 NA coding upstream 149610 2936943 ~ 2944472 (+)
AMCG00006358 NA coding upstream 159521 2908172 ~ 2934561 (+)
AMCG00006347 NA coding upstream 211865 2866303 ~ 2882217 (+)
AMCG00006364 NA coding downstream 39497 3151072 ~ 3177539 (+)
AMCG00006367 NA coding downstream 108644 3220219 ~ 3232977 (+)
AMCG00006370 NA coding downstream 181168 3292743 ~ 3301359 (+)
AMCG00006373 NA coding downstream 230964 3342539 ~ 3349221 (+)
AMCG00006369 NA coding downstream 240630 3352205 ~ 3354806 (+)
G109218 NA non-coding upstream 24854 3016779 ~ 3069228 (+)
G109217 NA non-coding upstream 65436 3004856 ~ 3028646 (+)
G109011 LOC100846954 non-coding upstream 575548 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 690931 2402903 ~ 2403151 (+)
G109004 LOC103376870 non-coding upstream 737844 2350754 ~ 2356238 (+)
G109260 NA non-coding downstream 123330 3234905 ~ 3236401 (+)
G109301 LOC103376870 non-coding downstream 228514 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 437039 3548614 ~ 3548988 (+)
G109405 NA non-coding downstream 587533 3699108 ~ 3714779 (+)
G109392 NA non-coding downstream 610944 3722519 ~ 3755041 (+)
G108626 rps5,LOC107086176 other upstream 1279472 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1352746 1735932 ~ 1741336 (+)
G108585 NA other upstream 1664095 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1778524 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1808030 1278460 ~ 1286052 (+)
AMCG00006366 NA other downstream 131362 3242937 ~ 3252080 (+)
AMCG00006368 NA other downstream 163207 3274782 ~ 3286179 (+)
G109309 NA other downstream 249779 3361354 ~ 3365565 (+)
G109362 NA other downstream 391606 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 458464 3570039 ~ 3621796 (+)

Expression


Co-expression Network