AMCG00006365


Basic Information

Item Value
gene id AMCG00006365
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3178729 ~ 3203887 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006365
ATGCGCGCACCAATCAGAGTGAGGCAGTCTGTGACGGTGCGTTGTCATGGGAGCCCCTCACGCAGCCGCAGCCGGTCCGAGATTGACGCGAAGCCACCTGCCATGAGCCACAGGGGAGACAGCATCCCTgtcagtgaggaggaggaggaggaggaagaagagagggaagaggaggaggaggaggaggaagaggaagagcgCACTGAGAGGGAGAAGCCCATTGCAATTCCTCTCCATGTGAACCTCCATGAGGAGGGGCCAGCAGACATTTCCTCAAGCCCTGCATTGCAGTGCCTCGATGAGCTGTTCTCTGCGGGAAAGATCTCTGGAAACCGAGAGGCCAAACTGAAGGCCAGCTTCACTCTGCTGCACAACACTTTGAAAAGGCAGCAGAAAGAGCTGCTGCAGGAAGAGCAGTTCCCCGAGGGCCCAGACACCGAGGTGCGGAGCATGAGGGAACAGCTGCTCCGCTTCCTTAATGACCTGCGGGTGGCCGAGGAGAGGGAGTACCAAGAGCTGGAGAAGAAGAGCATAGTGCTGAAGGAGAGCAGTCAGGAGCTGCGCCGAGAGTTTGCCCAGAGGAGGCCGGAGATCAAGGCTCTGCAAGAGGACATGGAGGCCACGCAGAGACACATCCAGCGTGAGCAGCAGGAGCTAGACAAGAAGAAGGAAGTCATCGAGAGCTGCGAGagtgAACTGGTCCGGCTACACACCATTCCCGGCCAGCTGGGGAAGGAGATGGAAGGATTAAACCGTAAGAAGATGGacttggaaaagaaaaaggcgGAGCTGGAGGAGCAGGTGTGTGAGCTGACGGCCGAGCAGAGACGCACGGAGAGCCGGGGCCGGGCactggaggaggagagacaggAGGTGATGAGGGAGctagaggagaggagggggcagCTCAGGAGGGAAGAACAGCACCACAACCAGCTGCTCAAGGAAAAGGAGCTGGCCAAAGAGAAGGAGGCTATCCTGATGGGAGAGAGAGCCGTCTTGGATATTAACCACCGTGACATCGCCCTGGAGAAGAAGAGGCAGCACGATATGCTGTCTCGGAATCTGAAGGAGGAAGAGCGACAGATGCGCAGCCTGAAGAAGGCGGAGCTGCAGCTGAAGCTGGCAAATGACGCCCTGGTGCAGACACAGTTTCTCCACAAGAAGGTCAAGTCGCAGATGGAGGGCTTGCCGAAGGGGGATGGACTTTTAGAGCAGAGACAGGAATTGCAGAAAGAGGTTGAAATCCTTAAACATAACGTGGTACAGGAGCAATCTCTGACGGAGCAGGAGGCCCACATGGTGGAGTACTGCCTGGCGCAGCAGCAGGATCTGGTGCAGGGCACCCAGCGGCACCGCAAGGAGCTCGCCCGCCTCACCTGCCTGACGCAGATCAAAGCCGACGAGAGGGAGCAGAAGTCCAGGGACCTGGTCAAGGTCAAGCAACAGTATGACCGCATCAAGCAAGAGCTGCGGAGTAGAAGCCTGGTGGTACAGGATCATAAGAAGCAATATCACGCAGTTCAATCCAGGTTGAACGCATTTGCAAAGCTCCATGACATCATAAAGGACGAGAGGGACAAATGTGAGAACCTCATTCAGATGGCTTCGCAGAGGACCGGGGAAATGGGGGGGAAATTCAAGATCCTGGAGAACGAGCGTGAGATTTTGGAGACCAGTGCCTTTAATAGGGACAGaagACCGCTTTCCAAGTGCCAGGACAGATGTCTGGAGCTGGAGAAGGCCCTGGAGGACCCTAGCAGGGAGAAGCACATCAGACTGCTCGAGGGAGCCGACCCCAAACGCAGCGAGCTCCTTGAAAAGATCAAACGGGTACCTGGGGACCACACGCCCTGTGCCCTCAGCGCGCCTGTGAGGAACCACCTTGTGTCAACgctctctctgctctgctctctcccCCACCAGCTGGAGCTGCATCTGGCAGAGCGCGAGCAACAGCTGCTGGAGAGGAATCTGGTGTATGAGCAGGTGGCCCGGCTAGCCCAGCGCCTCAGCATCAAGGAGGAGGATAGCCGGCCGGACGCGCTGGCTCTGGCCAAGAAGGTCGGCCGTGGATTCCCAGAGGACCAGAATATCAATATGGCGTGCGATTTTAAATCTGTTGCACAGGTGAACAGGCTGAAGGGACGCATCAGGGACACTACGCGGCGGATGATGGCGCTCATGGCGGAGCTGTCCATGCAGGAGACCCACAGCCTGGCGCTGCAGAAGGAGGTGCAGGACAAGGAGGTACTACTGGAGGCCTGCCACCGGAGATTGGAGCAGGGCCTGCCACCCAGTGACGACATGGACATGAAGCAGGAGCAGCGGAGGGCCAAGTGCAAGGAGAGAGCCAGGGTGGCCGAGGAGGAGGAATGGCACCAGCTGCCCAGTGGGGTGTACACCAGCGCAGAGGCCCGGCCCAATGCCTACATCCCCCAGGATGACCCCCTGCCCGTGCCCCGGCCCTACGGAGCCCTGGCCCCCTTCAAGCCCAGCAAGCCCGGCACGAACCTCAGACACATCCGCAAGCCCATGCCCAAGCCCATAGAGATATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006365 True 2559 mRNA 0.59 17 3178729 3203887

Neighbor

gene id symbol gene type direction distance location
AMCG00006362 NA coding downstream 39194 3137907 ~ 3139535 (-)
AMCG00006363 NA coding downstream 54529 3120277 ~ 3124200 (-)
AMCG00006361 NA coding downstream 61054 3112543 ~ 3117675 (-)
AMCG00006356 NA coding downstream 195922 2974697 ~ 2982807 (-)
AMCG00006355 NA coding downstream 208277 2965818 ~ 2970452 (-)
AMCG00006372 NA coding upstream 125469 3329356 ~ 3336253 (-)
AMCG00006371 NA coding upstream 152908 3356795 ~ 3361837 (-)
AMCG00006376 LOC101471702 coding upstream 235624 3439511 ~ 3452179 (-)
AMCG00006377 LOC103388862,LOC106582320,LOC103356805 coding upstream 272104 3475991 ~ 3479508 (-)
AMCG00006380 NA coding upstream 302424 3506311 ~ 3515208 (-)
G109163 NA non-coding downstream 346400 2818469 ~ 2832329 (-)
G109099 NA non-coding downstream 780739 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 788177 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding downstream 822491 2350754 ~ 2356238 (-)
G108948 NA non-coding downstream 1121107 2052991 ~ 2057622 (-)
G109294 NA non-coding upstream 82383 3286270 ~ 3287229 (-)
G109322 LOC103376870 non-coding upstream 136231 3340118 ~ 3433270 (-)
G109334 NA non-coding upstream 163310 3367197 ~ 3369548 (-)
G109432 NA non-coding upstream 344727 3548614 ~ 3561944 (-)
G109439 NA non-coding upstream 382709 3586596 ~ 3655123 (-)
AMCG00006354 NA other downstream 284195 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 591883 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 848738 2324131 ~ 2329991 (-)
G108938 NA other downstream 1048474 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 1154586 2020001 ~ 2024143 (-)
AMCG00006390 NA other upstream 494998 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 526155 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 948929 4152816 ~ 4158123 (-)
G109633 NA other upstream 961047 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 964163 4168050 ~ 4177052 (-)

Expression


Co-expression Network