AMCG00006366


Basic Information

Item Value
gene id AMCG00006366
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3242937 ~ 3252080 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006366
ATGAATGGAGCTGCAGTTAAAGGTGTTACTGATCCACAGAACAGATTGTCATTGCTCACTGAAGACGCCTCCCTTCTGATCACTGCTGTTCAGCCTGGAGACGCTGGACAGTACAGATGTAACCGGCAACATGTGGCAGAACTGGAGGTGGTGAGAGAGAGAGTCTCAGTGCCTGAGGGGAACAGTCTCCTCCTGAACTGCCGTGTCCCtcctccagcagagggcagcacaGTGCTGTGGAAACACATGGTTGCTGGAGGCAGCAAAGAAATCATAAAGGTGACAAAGGTGACATTCaaatataatggaaataaacCTGCAACCCCACTGAATTACCACCAGTTTCCTGATGGCTCTCTATCCATTAATAAAGTCCAGCCAGTGGACGCTGGGCAATTCTACTGTGATGGTCAGCCTGTGGCAGATGTGGAGGTGCTGACAGGTCCAGCTCACTACACTGTGTCAGAGGGGAGAACAGTACTGCTGCCCTGTAATATCTCTCAGCCTCCTATACCCAGTGAGAGAGTCCAGTGGACATTTAGTAACAGTGGCTCCAACTCTGAGACAATCCTGACCAGAGACGAGAACGGAACTGAAAAGAAACCTGGTCAAGATCACAGGTTCAGCCTATTGTTACCTCCTACTGACCTCACCCTGGTGATCAGAGCTGTCCAGCCCGCAGACTCTGGGCAGTACCTGTGTAACAGTGAACATGCTGCCCATTTACTGGTGATAAAGGGGTCCAAGCAGGAAGCCACATCGTTGAAGACACAGTCCACTGCAGGACCTGCTGCAGGACAGGACACCCCAGGACAGAcaaatgaggaggaggaggatgagatCCATTATGCCTCCCTGGGTCACCAGAACCGGACGACAGACCGACCCCGAGAGGAGCCCATAGACTCCAGTGTGGTGTACTCCACTGTGGCCCTCAAAAACATGACCTGA
>TU136762
ATGGTGTTTCTAATGCAAGCTCTTGTGTTCTGGGATTAGGGTCCAAGCAGGAAGCCACATCGTTGAAGACACAGTCCACTGCAGGACCTGCTGCAGGACAGGACACCCCAGGACAGAcaaatgaggaggaggaggatgagatCCATTATGCCTCCCTGGGTCACCAGAACCGGACGACAGACCGACCCCGAGAGGAGCCCATAGACTCCAGTGTGGTGTACTCCACTGTGGCCCTCAAAAACATGACCTGAGACGCACCGGACACCCAGCCCTGCACCCACCGACACTGAACTGTGTTAAGAAGATACAGCTGTTAATGTCAGTGTCTGGTTGCCCTGACACTTAAAATACAGGAAGGAACGTCACCTGAGAATAGATTTGAtagatgtattgtatttaaacaagaaaaattgTTTAGAAACATATCTATACATTCAGGAAATGTAATGCAGCTGAATTTAGAATCAAAATACATGTCAGCTTGTACTTGAACTGGAGTAATAATCAGACCAAACCAGACCTTCGAACTGCCCCCTGAATTACACATGACAAGCTTGTACCCTTTCACGTTTCTAGTCATAAATAGTAGACGGTAGCCCCtggcaataaattaaaccacaatagGGTACAGATTATATCTGGTAAATGTATTCATgcgtaggtcaaagttttgatttggtttggtttgattttaagTAATGGCACCGAATCCCACCCTGTAACACTGAGACCCCTTCAAGCAGTAGAAGATACATGATATAGATGGACCAGTGAATTAACTCTGTTCTGACTGTATTCCtatatactgtgctgtattcatttgtattgatgCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006366 True 951 mRNA 0.52 6 3242937 3251497
TU136762 False 834 lncRNA 0.44 3 3247869 3252080

Neighbor

gene id symbol gene type direction distance location
AMCG00006367 NA coding upstream 9960 3220219 ~ 3232977 (+)
AMCG00006364 NA coding upstream 65398 3151072 ~ 3177539 (+)
AMCG00006360 NA coding upstream 131362 3094082 ~ 3111575 (+)
AMCG00006359 NA coding upstream 241647 2989143 ~ 3001290 (+)
AMCG00006353 NA coding upstream 282405 2955335 ~ 2960532 (+)
AMCG00006370 NA coding downstream 40663 3292743 ~ 3301359 (+)
AMCG00006373 NA coding downstream 90459 3342539 ~ 3349221 (+)
AMCG00006369 NA coding downstream 100125 3352205 ~ 3354806 (+)
AMCG00006375 NA coding downstream 167235 3419315 ~ 3421518 (+)
AMCG00006374 NA coding downstream 174345 3426425 ~ 3428561 (+)
G109260 NA non-coding upstream 6536 3234905 ~ 3236401 (+)
G109218 NA non-coding upstream 173709 3016779 ~ 3069228 (+)
G109217 NA non-coding upstream 214291 3004856 ~ 3028646 (+)
G109011 LOC100846954 non-coding upstream 724403 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 839786 2402903 ~ 2403151 (+)
G109301 LOC103376870 non-coding downstream 88009 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 296534 3548614 ~ 3548988 (+)
G109405 NA non-coding downstream 447028 3699108 ~ 3714779 (+)
G109392 NA non-coding downstream 470439 3722519 ~ 3755041 (+)
G109412 NA non-coding downstream 477807 3729887 ~ 3730840 (+)
G108626 rps5,LOC107086176 other upstream 1428327 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1501601 1735932 ~ 1741336 (+)
G108585 NA other upstream 1812950 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1927379 1286829 ~ 1315558 (+)
AMCG00006276 NA other upstream 1956885 1278460 ~ 1286052 (+)
AMCG00006368 NA other downstream 22702 3274782 ~ 3286179 (+)
G109309 NA other downstream 109274 3361354 ~ 3365565 (+)
G109362 NA other downstream 251101 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 317959 3570039 ~ 3621796 (+)
AMCG00006385 NA other downstream 347161 3599241 ~ 3612758 (+)

Expression


Co-expression Network