AMCG00006368


Basic Information

Item Value
gene id AMCG00006368
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3274782 ~ 3286179 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006368
ATGGTAACTCAGAgggtgctgggaaggagagagaagttccggttcaaaggtgggggtaaccagaaggtgaggtgggccttccggtctgtgAACAGATTCTCACTGCTCAGTGACGCCTCCCTTCTGATCACTGCTGTTCAGCCTGGAGACGCTAGACAGTACAGCTGTAACCAGAAGCATGTGGCAGATCTGGAGGTGGTGAGAGGTCCAGCTCACTACACTGTGTCGGAGGGGAGAACAGTACTGCTGCCCTGTAATATCTCTCAGCCTCCTATACCCAGTGAGAGAGTCCAGTGGACATTTAGTAACAGTGGCTCCAACTCTGAGACAATCCTGACCAGAGACGAGAAGGGAACTGAAAAGAAACCTGGTCAAGATCACAGGTTCAGCCTATTGTTCCCTCCTACTGACCTCACCCTGGTGATCAGAGCTGTCCAGCCCGCAGACTCTGGGCAGTACCTGTGTAACAGTGAACATGCTGCCCATTTACTGGTGATAAAGGGTCCTGCTGCAGGACAGGACACCCCAGGACAGGCgaatgaggaggaggagaaggaggatgAGATCCATTATGCCTCCCTGGGTCACCAGAACCGGAAGACAGACCGACCCCGAGAGGAGCCCAGAGACTCCAGTGTGGTGTACTCCACTGTGGCCCTCAAAAACACAGCCTGA
>TU136782
ATGGTGTTTCTAATGCAAGCTCTTGTGTTCTGGGATTAGGGTCCAAGCAGGAAGGCACATCGTTGAAGACTGAGTCCACTGCAGGTCCTGCTGCAGGACAGGACACCCCAGGACAGGCgaatgaggaggaggagaaggaggatgAGATCCATTATGCCTCCCTGGGTCACCAGAACCGGAAGACAGACCGACCCCGAGAGGAGCCCAGAGACTCCAGTGTGGTGTACTCCACTGTGGCCCTCAAAAACACAGCCTGAGACGCACCGGACACCCAGCCCTGTGCCCACTGGCACTGGGTACGACACACTGAACTGTGGGCCCGTTCCTGGCCAATGAAATCCTTCCGTTAAGAAGATATGTCTGTTAATTTCAGTGTCTGGTTACCCTGACACTAAAGATAGAGGAAGGAATGTCACCTGAGAATGGATGTGATAGatgcattgtatttcaaaaagaaaaatggcttAGAAAcatatatactgaaatacattCCTGAAATGTAATGCAGCTGATTTTAGAATATGTCAATGTAGCTTTAAATATGTTTCAGCGAGCACCAGAACACACAACAGTTTCTGCCCACGCATGGCACAATACATGTCAGCTTGTACCTTAACCAGAGTAAGAATCAGACCAAACCAGACCTTTGAGCTGCCCCCTGAATTACACGTACAAGCTTGTACTCTATCACGTTTCTACTAATAAATAGtagaatacaaaattacaatagGGTACAGATTATAtctggtaaatgtattttatgcataggtcaaagtttgtatttggttttcatgTTAAGTAATGGCACAGAATAAGAAGTCCAACCCTGTAACACTGAGACCCCTTCAACAGCAGAAGATACATGATATAGATGGACCAGTTAATTAACTCTGTGCTGAGTGTATTCCtatatactgtgctgtattcatttttattgctgGGTTAACTATTGActtcatttcaattttattatgcatttaatagtAGAAACTACATGATtttggggacttgattcaattcttcaaaatcatgaaaggcattaaccacatcaaaccagaggagcatttccagatcagcagggacacacgcacccgggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggttgaagctgaaaatttgggaacatttaaaaatagactggataggatccttgtatcacttagttatttatggacatcaaatgagcacgatgggtcgaatggcctcctctcgtttgtaaacattatgttttcatgttctcatgttctttcttatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006368 False 675 mRNA 0.54 5 3274782 3285081
TU136782 True 1355 lncRNA 0.42 3 3283136 3286179

Neighbor

gene id symbol gene type direction distance location
AMCG00006367 NA coding upstream 41805 3220219 ~ 3232977 (+)
AMCG00006364 NA coding upstream 97243 3151072 ~ 3177539 (+)
AMCG00006360 NA coding upstream 163207 3094082 ~ 3111575 (+)
AMCG00006359 NA coding upstream 273492 2989143 ~ 3001290 (+)
AMCG00006353 NA coding upstream 314250 2955335 ~ 2960532 (+)
AMCG00006370 NA coding downstream 6564 3292743 ~ 3301359 (+)
AMCG00006373 NA coding downstream 56360 3342539 ~ 3349221 (+)
AMCG00006369 NA coding downstream 66026 3352205 ~ 3354806 (+)
AMCG00006375 NA coding downstream 133136 3419315 ~ 3421518 (+)
AMCG00006374 NA coding downstream 140246 3426425 ~ 3428561 (+)
G109260 NA non-coding upstream 38381 3234905 ~ 3236401 (+)
G109218 NA non-coding upstream 205554 3016779 ~ 3069228 (+)
G109217 NA non-coding upstream 246136 3004856 ~ 3028646 (+)
G109011 LOC100846954 non-coding upstream 756248 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 871631 2402903 ~ 2403151 (+)
G109301 LOC103376870 non-coding downstream 53910 3340089 ~ 3393931 (+)
G109389 NA non-coding downstream 262435 3548614 ~ 3548988 (+)
G109405 NA non-coding downstream 412929 3699108 ~ 3714779 (+)
G109392 NA non-coding downstream 436340 3722519 ~ 3755041 (+)
G109412 NA non-coding downstream 443708 3729887 ~ 3730840 (+)
AMCG00006366 NA other upstream 22702 3242937 ~ 3252080 (+)
G108626 rps5,LOC107086176 other upstream 1460172 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1533446 1735932 ~ 1741336 (+)
G108585 NA other upstream 1844795 1350383 ~ 1429987 (+)
AMCG00006275 NA other upstream 1959224 1286829 ~ 1315558 (+)
G109309 NA other downstream 75175 3361354 ~ 3365565 (+)
G109362 NA other downstream 217002 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 283860 3570039 ~ 3621796 (+)
AMCG00006385 NA other downstream 313062 3599241 ~ 3612758 (+)
AMCG00006387 NA other downstream 351564 3637743 ~ 3648911 (+)

Expression


Co-expression Network